Syntrophothermus lipocalidus: Slip_0282
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Entry
Slip_0282 CDS
T01253
Name
(GenBank) putative sigma54 specific transcriptional regulator
Organism
slp
Syntrophothermus lipocalidus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
CBS
PAS
PAS_9
Sigma54_activ_2
PAS_4
HTH_50
PAS_8
AAA_5
AAA
AAA_16
PAS_10
Mg_chelatase
HTH_38
AAA_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADI01069
UniProt:
D7CJV5
LinkDB
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Position
283724..285817
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AA seq
697 aa
AA seq
DB search
MRLEDIMTPNPVLLHPEMPVSEAAKVFVEHGIDGAPVVDERRRVIGLLTKSHILRLVSQE
QDMSIPVSEVMTRRVLVGHPRDELSQYFRTTVKRIPVVREDEIVGIVTNSDFLEAFFDSY
YRMSTELKAVINATHNVIIAVNEKGIIKLINQAAEKALQVTAEEALGRHVAEIIPNTGLL
EVLKEGKTQTAQKIWLNSRCFISNRTPIWKGETLIGAVAVLQDVSELEAVSQELQFVKDL
NEVLNAIIESSFDGLFITDRNGYILRANQALERITGFEPGTLVGQNIEVLVKKGIVAQEA
ASLGISTDQPCTSMQTTPEGKAILWTGSPVFDEDGRVTRIVYNVRDMTELTRLEQKLEQA
RSLSQHYESQLKTLKLQYVGSDRLVVGSAAMRKLIEMVVRVGQVDSTVLITGESGTGKEL
IAETIHNNSRRREGPFIKVNCGAIPEHLLESELFGYEAGAFTGARREGKAGYFEMADGGT
LFLDEIGELPLNLQVKLLRVLQSKEVTRVGSTRPTRVDARILAGTNRNLEEMVQNKQFRE
DLYYRLNVIPLYVPPLRERKEEIPLLVVHFVKLINQKYEMNKRFSPEAIEVLMKYDWPGN
VRELENLVERLLVTCSGDIVKVEDLPPQFGGGTTGAAEVRVSGILPLKDAVESVERQILE
KAYAEYRTTRQIASKLRVDASTIVRKAAKYGLINKLN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
ttgaggcttgaggacatcatgactcccaacccggttctcttacatcccgaaatgcctgtt
tccgaggcggccaaagtctttgtcgaacatggaatagatggggcgccggtagtcgatgaa
cgccgccgggttatcgggttgctgaccaagagccatatcttgaggctggtaagccaggag
caggacatgtctattccggtgagtgaggtgatgacaagacgggtcttggttggccatccg
agggacgagctttctcagtatttccgcactacagtgaaacgaattccagtagtacgagaa
gacgaaattgtagggattgtgactaattccgatttcctagaggctttttttgattcttac
taccggatgagtaccgaattgaaagcggtaataaacgctactcataacgtgattattgct
gttaatgaaaagggaatcatcaagcttatcaaccaagcggcagagaaggctttgcaggtt
acggccgaggaggcgctgggtaggcacgtagctgaaatcatacctaacacggggttactg
gaggtcttgaaagagggtaaaacccaaaccgctcaaaaaatatggctcaatagccgttgt
tttatttctaaccgtacgcctatctggaaaggcgagacccttattggcgccgtagccgtg
cttcaggacgtatcagaactggaggccgtgtcccaggagctacagtttgtcaaggatctc
aatgaagtactcaatgctattatcgagtcttcgtttgacggtctgttcatcactgatcga
aacggctacattctgcgggccaaccaagctttggaaagaattaccgggtttgaaccagga
accttggtggggcagaacattgaagttttggttaaaaagggcatagttgctcaagaagct
gctagcctggggatcagtaccgaccaaccttgtacttcgatgcagacaacccccgagggt
aaggccatcctgtggacaggcagcccggtgttcgatgaagacgggcgggtcacaaggatt
gtctacaatgtgagggatatgacggaactgacccggcttgaacagaaactggaacaggcc
cgcagtctgagccaacactatgaaagccagctgaagactttgaagctgcagtacgtgggt
tcggatagattggttgtcggttcggctgccatgcgtaagctcatagaaatggtggtaagg
gtgggacaggtagactcaaccgtgttaatcacgggagaatcggggaccgggaaagagttg
atagcggagacgattcataacaacagccgaaggcgagaaggaccttttatcaaagtaaac
tgcggcgctattcctgagcatttattggaatcagaacttttcggttatgaggctggagct
tttacaggagccaggcgagaaggaaaagccggttactttgaaatggcagatgggggcacg
ctttttttagatgagattggagaactgcccttgaacctccaggtaaaactattgcgggtg
ttgcagagtaaagaggtaacgcgggttggtagcacccggcccacacgagttgacgccagg
attctcgcggggacaaaccgcaatctcgaggaaatggttcaaaacaagcagttccgtgaa
gacctttactaccgtttaaacgtgataccgctttacgtaccgccgctgagagagcgaaaa
gaggagattccgttgttagttgtgcattttgtaaaattgataaatcaaaaatacgagatg
aacaagcgtttttctccggaagctatcgaggttttaatgaagtatgattggcccggcaat
gtaagggaattggagaacctggtagaaaggttgctggtcacgtgtagcggtgacatagtg
aaggtggaagatctcccaccacagtttggtggaggaacaacgggggccgcggaagtaagg
gtttcgggcattcttcccttaaaagacgcggtggagagcgtggaaaggcagatattagaa
aaagcctatgctgaataccgtacaaccaggcaaatagctagcaaactaagagtcgatgct
tcgactatagtgagaaaggctgccaaatacgggctgataaataaactgaattag
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