KEGG   Streptomyces lincolnensis: SLINC_5715Help
Entry
SLINC_5715        CDS       T04801                                 

Definition
(GenBank) DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sls  Streptomyces lincolnensis
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sls00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    SLINC_5715
Enzymes [BR:sls01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SLINC_5715
DNA repair and recombination proteins [BR:sls03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SLINC_5715
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(6791637..6792518)
Genome map
AA seq 293 aa AA seqDB search
MTPITEVEGRRLALSNLEKVLYPATGFTKGEVLHYYATTAEVLLPHLRGRSVSFLRYPDG
PDGQVFFTKNVPPGTPDWVTTAEVPRSEGPARMVLVQDLASLMWAANLVTEFHTHQWLVD
TPDEADRLVLDLDPGAPATVVECCEVALWLRERLAADGIEAYPKTAGSKGLHLLAAVRGA
SSDQVSEYAKQLAVEAERAMPRLVVHRMTRNLRPGKVFVDWSQNAARKTTATPYTLRARA
RPLVSAPVTWTEVEECGDPARLDFQAPDIAPRVRDHGDLLAPLLDRQHAGALP
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgatcacagaggtggaggggcgacggctcgcgctcagcaacctggagaaggtg
ctgtatcccgcgaccggtttcaccaagggcgaggtgctgcactactacgcgaccaccgcc
gaggtcctgctgccccatctgcgcgggcggtcggtgtccttcctgcgctatcccgacggc
cccgacggccaggtgttcttcaccaagaacgtcccgcccggtacacccgactgggtcacc
accgccgaggtgccccgctcggaggggccggcccggatggtgctggtgcaggacctggcg
agcctgatgtgggcggcgaacctggtcaccgagttccacacccaccagtggctggtggac
acgcccgacgaggccgaccggctggtgctcgacctggacccgggggcgccggcgacggtc
gtcgagtgctgcgaggtcgccctgtggctgcgcgagcggctggcggcggacggcatcgag
gcgtacccgaagaccgcggggtcgaaggggctgcacctgctggcggccgtacggggggcc
tcgtccgaccaggtttcggagtacgccaagcagctggccgtcgaggcggagcgggcgatg
ccccggttggtcgtgcaccggatgacgcggaacctcaggcccggaaaggtgttcgtggac
tggagccagaacgccgcgcgcaagacgacggccacgccgtacaccctgcgggcccgcgcc
cggccgttggtgtcggcaccggtgacctggacggaggtcgaggagtgcggagaccccgcc
cggctggacttccaggcaccggacatcgcgccccgcgtgcgggaccacggcgatctgctg
gccccgttgctcgaccgacagcacgccggcgcactgccgtga

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