Sideroxydans lithotrophicus: Slit_1367
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Entry
Slit_1367 CDS
T01196
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Slit_1367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slt03400
]
Slit_1367
Enzymes [BR:
slt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Slit_1367
DNA repair and recombination proteins [BR:
slt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Slit_1367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
BLH_phosphatase
Phage_GPO
Motif
Other DBs
NCBI-ProteinID:
ADE11604
UniProt:
D5CRL8
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All DBs
Position
1356760..1358139
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AA seq
459 aa
AA seq
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MKKICMDECEKQGSLMDKNHVLSVRELNLAAKQLIEGGLPLLWVRGEISNFVSAASGHWY
FSLKDEQAQVRCVMFRHKSQYLEFKPSNGMQVEVLALATLYEARGDFQLTLEKMRPAGLG
ALYEAFEHLKNKLEAEGLFDAGRKRDLPLLPKQIGIVTSPQAAALRDVLRTLANRMPNVP
VLLYPTPVQGEGAAQKIAQAIRLASQRAECDVLIVCRGGGSIEDLWAFNEEVVARAIAAS
HIPVVSGVGHETDFTIADFVADLRAATPTAAAQAVVPDKQELRQRLAQHRQRLVRAVARR
FEQGMQQVDFLQHRLVHPAQRIRQQGERLEALQQRMRFAHDHAMQRQQGRWSMLWHRLRG
ARPNLARLQEQQSNLARRLNGAMLQTLDRHDARLTALRQHLQLLDPKQVLARGYSMVRDV
QGNIVVSSDSLELGEKLDITFAQGGVHAVVQEKHEPNSD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatttgcatggacgaatgtgaaaaacagggaagtctgatggacaagaaccat
gtattgagtgtgcgcgaactgaatctcgcggcgaaacaattgattgagggaggattgccg
ttgttgtgggtgcgcggcgagatatccaatttcgtcagcgcagcttctggacactggtat
ttttcactcaaggacgagcaggcgcaggtgcgttgcgtgatgttccggcataaaagccag
tacttggaattcaagccgagcaacggcatgcaagtagaggtgctggcgctggcgacattg
tatgaagcgcgcggcgatttccagctgacgctggaaaagatgcgtccggccggattgggt
gcactgtatgaagcgttcgagcatctgaaaaacaaacttgaagccgagggcttgttcgat
gccgggcgcaagcgcgacttgccgttgctgccgaagcagataggtatcgtgacctcgccc
caagcggcggcgttgcgcgatgtattgcgtaccctggcgaaccgcatgcccaatgtgcct
gtgctgttgtatccgacaccggtgcagggcgaaggcgcagcacaaaagatcgcgcaggcg
atcaggttggcgagtcagcgcgccgagtgtgatgtgctcatcgtgtgccgtggtggcggc
agtatcgaagacctgtgggcgttcaatgaagaggtggttgcacgcgccattgcagccagc
catatcccggtggtgagcggtgtcgggcacgaaacagatttcaccattgccgatttcgtg
gccgatcttcgcgccgccacaccgacggcggcggcacaggcggtggtgccggataagcag
gagctgcggcaacgattggcgcagcatcggcaacgcttggtacgcgctgttgcgcggcga
ttcgagcaaggcatgcaacaagtggatttcctgcaacaccggctggttcacccggcgcag
cgcatccggcagcaaggcgagcgcctggaagcgctgcagcaacgcatgcgattcgcccat
gaccatgcaatgcagcgtcagcaaggccgctggagcatgttgtggcacaggctgcgcggg
gcgcgcccgaatctcgcccgactgcaggagcagcagtctaatctggcgcgccgcttgaat
ggtgccatgttgcaaaccctggatcgccatgatgcacgcctgaccgcattgcggcagcat
ttgcaacttctcgatccgaaacaggtgctggcgcgcggctacagcatggtgcgcgatgtg
cagggcaatatcgtcgtgagcagcgatagtcttgaactgggcgagaagctggatatcacc
tttgcccagggtggcgtgcatgcagtggtgcaggaaaagcacgagcccaattcagattag
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