Solanum lycopersicum (tomato): 101254698
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Entry
101254698 CDS
T02665
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101254698
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101254698
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101254698
03019 Messenger RNA biogenesis [BR:
sly03019
]
101254698
03041 Spliceosome [BR:
sly03041
]
101254698
Enzymes [BR:
sly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101254698
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
101254698
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101254698
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101254698
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101254698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Tnp_22_dsRBD
Motif
Other DBs
NCBI-GeneID:
101254698
NCBI-ProteinID:
XP_004240775
UniProt:
A0A3Q7HKZ9
LinkDB
All DBs
Position
6:18924301..18933545
Genome browser
AA seq
304 aa
AA seq
DB search
MDPAAVDRIIEKLLEVRLSKPGKLVQLSESEIKQLCVSSRDIFVKQPNLLELEAPIKICG
DIHGQYSDLLRLFEYGGFPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFNVKLWKSFTDCFNCLPVAALIDEKILCMHGGLSPDLSSL
DQIRNLPRPTAIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVSEFLSKHDLDL
VCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMGVDENLMCSFQILKPAEKKN
KFMM
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgcagctgtcgataggattattgagaagctattagaagttcgattatcgaag
cctggcaagttggtgcagctttccgagtctgaaatcaagcaactatgtgtttcctctaga
gatatcttcgttaaacagccaaatctacttgaacttgaagcacccatcaaaatttgcggt
gacattcatgggcagtacagtgatctgttgaggctttttgaatatggtggttttcctccg
aaggctaactacttattcttgggtgattatgtagatcgtgggaagcagagcttggaaaca
atatgcctcttgcttgcctataagatcaagtatcctgagaactttttcttgcttagagga
aaccatgaatgtgcttctataaataggatatatggattctatgatgagtgtaagcgtcgg
ttcaatgtgaaactatggaagtcctttacagactgttttaattgtcttcctgtagcagca
cttatcgatgagaagatattatgcatgcatgggggtctgtcccctgatctttctagtttg
gatcagattcggaacttaccacgtccaactgccatcccggacactggtttgctttgcgat
ttactttggtcagatcctggtaaagatgtaaagggttgggggatgaatgataggggagtt
tcatacacctttggtcctgataaagtttctgagtttttgtcaaagcatgacttggacctt
gtctgtcgtgcccatcaggtcgtggaggatggttatgaattctttgctgacaggcagctt
gtcaccattttttcagctcccaattactgcggcgagtttgacaatgctggtgctatgatg
ggtgttgatgaaaacttgatgtgctctttccaaattcttaagccagcagagaagaaaaat
aagtttatgatgtga
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