Serratia marcescens subsp. marcescens Db11: SMDB11_4618
Help
Entry
SMDB11_4618 CDS
T03985
Name
(GenBank) putative quorum-sensing LuxR-family transcriptional regulator
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SMDB11_4618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smac03000
]
SMDB11_4618
Transcription factors [BR:
smac03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SMDB11_4618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
YukC
Motif
Other DBs
NCBI-ProteinID:
CDG15180
LinkDB
All DBs
Position
4973197..4973913
Genome browser
AA seq
238 aa
AA seq
DB search
MEDEYNLSNIIGKRLEAALGELGDLLWAYVVLSKKDIACIFGVTNYPDDWVKKYQEQGLQ
YIDPVVLTARNRLTPFAWDEQIMADAGLHFPELFEQAREFGVTHGYTFVLHDYNDNLVTL
SFAFNLEQRAEAIQALTERKGDISVLLASIHESYLALSPLSAKNAATLERNARFTDRENE
ILYWASVGKTYQETAMILGIKTGTIKFHMSNVVKKLGVTNARHAVRLGMELRLIKPVE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaatataatctcagcaacattatcggcaagcgcctggaggcggcacttggg
gagttgggcgatctcctgtgggcgtatgtagtcctatccaaaaaagacattgcctgcatt
tttggcgtcaccaactatccggatgactgggtaaaaaagtatcaagagcaggggttgcag
tacattgatccggtggtgcttaccgcccgcaaccgcctgacccccttcgcctgggacgag
caaatcatggccgacgcggggctgcactttcccgaactgttcgaacaggcccgcgagttt
ggcgtaacgcacggctataccttcgtgctgcacgattacaacgataacctcgtcacgctt
tcctttgccttcaaccttgagcagagagcggaagccatccaggcgctcaccgagcgtaaa
ggtgatatttcggtattgctggcttcaatccatgagtcctatctggcgctgtccccactg
tcagcaaaaaacgctgcgaccctggagcgtaacgcccgctttaccgacagggaaaacgag
atcctctattgggccagcgtgggtaaaacctaccaggaaacggcgatgatcctgggcata
aagaccggcaccatcaagtttcatatgtccaacgtcgtcaaaaagttgggtgtaacaaat
gcccgacatgccgtgcgcctggggatggagctgcggctgattaaaccggtggagtga
DBGET
integrated database retrieval system
