Serratia marcescens SM39: SM39_4632
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Entry
SM39_4632 CDS
T03592
Symbol
cytR
Name
(GenBank) LacI-family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
smar
Serratia marcescens SM39
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smar03000
]
SM39_4632 (cytR)
Transcription factors [BR:
smar03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SM39_4632 (cytR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
MarR_2
HTH_Crp_2
HTH_3
Sigma54_DBD
TetR_N
MerR
Motif
Other DBs
NCBI-ProteinID:
BAO36551
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Position
complement(4812952..4813980)
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AA seq
342 aa
AA seq
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MEHKKELSMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHRQIACVAGPEQMPLSHYRLQGYVQALRRNGITVESSYITRGDFTYEAGAQALTALM
AQPKPPTAVFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDLKLAQYCDPPLTTVAQPR
FQIGQQAMLLLLEQLNGQTVASGSRLLDSELIIRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagaaagagttatccatggcgaccatgaaagacgtcgccgaaatggcgggc
gtttcaacggctaccgtatcgcgtgcgctgatgaatccggaaaaggtgtcaacgccgacg
cgccagaaagtggaacaggccgtcctggccgtgggttattctcctcatgctctgtcacgc
aatatcaagcgcaacgaatcccgcaccatcctggtgatcgtgcccgacatctgcgatccg
tttttcgccgatgtgatccaggggatcgaacagaccgccgcccaacaaggctatctggtg
ctgatcggcgactgcgcgcagcaaaaccagcaggagcgcaccttcgtcaatctgatcatc
accaaacagatcgacggcatgctgctgctgggctccaacctgccgttcgacgccagcaag
gaagaacagcgcaacctgccgccgatggtgatggccaacgagttcgctcccgagctggaa
ctgccgacggtgcacatcgacaacctgaccgccgcctttgaagccgtgcattatttgcat
caattgggccaccggcagatcgcctgcgtcgccgggccggaacagatgccgctgagccat
tatcggctgcagggttacgttcaagcgctacgtcgtaatggcattaccgtcgaaagcagc
tatattacccggggtgattttacctacgaagctggcgcgcaagcgctgacggcgctgatg
gcacagccgaaaccgccaacggcggtattctgccacagcgacgtcatggcgatcggcgtg
ctgtcccaggcgaagaaaatggggctgcgggtgccgcaggatctgtcgatcgtcggcttt
gacgacctcaagctggcgcagtattgcgatccgccgctgaccacggtggcacagccgcgc
ttccagatcggccagcaggcgatgttgttgctgttggagcagttgaacggccagacggtg
gccagcggctcccggctgttggacagtgaattgattatcagaggcagcaccgctgccccg
aaacgctag
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