Sphingopyxis macrogoltabida 203: LH19_04200
Help
Entry
LH19_04200 CDS
T04627
Name
(GenBank) hypothetical protein
KO
K04043
molecular chaperone DnaK
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH19_04200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smaz03019
]
LH19_04200
03110 Chaperones and folding catalysts [BR:
smaz03110
]
LH19_04200
03029 Mitochondrial biogenesis [BR:
smaz03029
]
LH19_04200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smaz04147
]
LH19_04200
Messenger RNA biogenesis [BR:
smaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LH19_04200
Chaperones and folding catalysts [BR:
smaz03110
]
Heat shock proteins
HSP70 / DNAK
LH19_04200
Mitochondrial biogenesis [BR:
smaz03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
LH19_04200
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
LH19_04200
Exosome [BR:
smaz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LH19_04200
Exosomal proteins of breast cancer cells
LH19_04200
Exosomal proteins of colorectal cancer cells
LH19_04200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
YfdX
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
ALJ12063
UniProt:
A0A0N7I0W6
LinkDB
All DBs
Position
complement(836026..838536)
Genome browser
AA seq
836 aa
AA seq
DB search
MYLGIDLGTSNSAIVGIDSGGIRLFKTDDGKDVLSSMLHFDRRGHMSVGTRAQAQAELAP
ENVAQGFKRLMGTSSTIELKGAEKTLTPEEASSEIIRQLIRQTTAEAGSVDVEGAIITIP
AAFNQMQSEATIRAAREAGLPRVGLLQEPVAAAMAALEGASRRDGRFLVYDLGGGTFDVA
LVEASGGAVNVIAHEGINMLGGRDFDRSILDSIVRPWLAGKFNLPADASVRPEYRRMFGI
LRMKVEMAKIELSTRDKAIVFLSEEDARTTDESGAEIYAEVEVTRAQLEGLIADQVSDSI
ALCRKILTDNGLSQDDIDRIVFIGGPSKMPIIRETVSRELGIPADHKTDPMTAVARGAAI
FAESRDWGNPTGQRKSARGTIAVTGKLELKLAFTARTSDENARLRITSDTRGQTYRYQIT
GPQGFDSGIVNFDGSASLSLPLPHLGAHQFQLSVTDQDGRPACATQTIEFHRSAATAAAI
HATQTVSVKVADGPASERRNILVPLISKGTPLPVKGTSAYRLRETLTGGVSSHFDVELFN
HAEGVDDPLLNLSIGVFRVHADDILDQGDTLVAGSSIEILWSMDDNGLINCEIAIPDLGI
HLDNKSYYVPQANHERFDGDEGGQLASKKLNEAQEALSHARSALGASSELDRMERRLARQ
QELLDNSTDAEARRSVTEEALHVQQELARLGDAPEHRKAILLEEIDRIEEGAADLIDKIE
AETAQRLSILLHSAREELSNGNWKKARDLVEQAHAIFQRALFQQPAFIAAVFENLRDERF
SALDKSLHDRLSSEGEAAISNGDVEGLRDVVAQMFGNRMPTEHSSKGVSMLAGLLR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcgggattgatcttggaacctcaaattcggcgatagtcggcatcgatagcggc
ggtatccggctcttcaaaacggacgacgggaaggatgtgctgtcgagcatgctccacttc
gaccggcgcggtcatatgtccgtgggaacccgcgctcaggcacaagcggagctcgcgccg
gaaaacgtcgcgcagggtttcaagcggctcatggggacatcgagcacgatcgagctaaag
ggcgcggaaaaaacgctcactcctgaagaagcaagctcggagattatccgacagctcatt
cggcagacgacggcagaagccggctcggtcgatgtggaaggcgcgattatcacgatcccc
gcagccttcaaccagatgcagtcagaggcgacgatccgtgctgccagggaggcagggtta
ccacgcgtcggattgcttcaggaacccgtggccgcggccatggccgccctggaaggtgcg
tcacggcgtgatggccgctttctcgtttacgatctcggcggcggcactttcgacgttgcg
ttggttgaagccagcggcggggccgtcaatgtgatagcgcacgaaggcatcaatatgctt
ggtggccgtgacttcgaccggagcattttggattccatcgtgcgcccctggctcgcgggc
aaatttaacctgcccgccgacgcctcggttcgtcccgaatatcggcggatgtttggtatc
ctgcgaatgaaggtcgagatggccaaaatcgagctatctacccgcgacaaagctattgtc
ttcctgagcgaagaggatgcgcgaaccaccgacgaatccggcgccgagatatacgccgaa
gtcgaggtcacgcgcgctcagcttgaagggctgatcgcggaccaagttagtgactcgatt
gcattgtgccgtaagatactgacggacaatgggttgagccaagatgacatcgaccggatc
gttttcattggcggaccgtcaaaaatgccgatcatacgcgagacggtgagccgcgaactg
gggattccagcggaccataaaaccgatccgatgacagccgttgcgagaggcgccgcaatc
ttcgcagagagtcgcgattggggaaatccgacggggcaaaggaaaagcgcacgcggaacc
atagcggtcaccggaaagcttgaactgaagctggcattcaccgcgcggacgtcggacgaa
aatgcacggttgcgtatcacctccgacacgcgcggccagacttatcgctatcaaattaca
gggccacaaggcttcgatagcggaatcgtcaacttcgacggcagtgcctcgctcagcctt
cctctgccacacctcggcgctcatcagttccagttgtccgttaccgatcaggacggccgt
cccgcatgtgccacccaaaccatagaatttcacagatcggcagcgactgcggccgccatc
cacgcaactcaaaccgtctcggtcaaggtcgcggacggccctgcgtctgagcgccgcaac
attctcgtgccactcatttcgaaaggcacgccgctaccggtcaaaggcacgtcggcctat
cgtcttcgagaaacgttgaccggtggcgtgtcctcccatttcgatgttgaattgttcaat
catgcagagggggtcgatgaccccctgctaaacctgtccatcggcgtctttcgcgttcac
gcagacgacatccttgatcaaggcgacacgttggttgcgggttccagcatcgagatcctt
tggagcatggatgacaatggtttgatcaattgcgaaattgcgattccggaccttggaatt
catttggacaacaagagctactatgtcccgcaagcgaaccatgaacgcttcgatggtgac
gagggaggtcaactcgcgtccaagaagctgaacgaggcgcaggaagccctctctcacgca
aggtccgccctcggcgcgtcgtctgaactggaccgaatggagcggaggcttgcgcgccag
caggaactgctcgacaattccaccgacgccgaagcccggcgttcggtgacggaagaagcg
ctgcacgtccaacaggaacttgccaggcttggtgatgcaccggagcatcgcaaagcaatt
ctgctcgaagagatcgaccggatcgaggaaggtgcggccgacctcatcgacaaaatcgag
gcagaaacggcccagcgcctttccatcctgctacattcggctcgcgaagaactcagcaac
ggcaattggaagaaggctagagacctcgtcgagcaggcgcatgcgatctttcaacgcgcc
ctatttcaacaacccgccttcattgctgccgtcttcgaaaaccttcgtgacgagcggttc
tccgcgctcgataaaagccttcacgatcgtctctccagcgaaggcgaagcagcgatctct
aacggtgatgtggaggggttgcgagatgtggtcgcgcagatgttcggaaatagaatgccg
actgaacactcttcgaagggcgtctcaatgctcgccggcctcctgcgataa
DBGET
integrated database retrieval system
