KEGG   Streptococcus mutans NN2025 (serotype c): SmuNN2025_0052
Entry
SmuNN2025_0052    CDS       T01185                                 
Symbol
rubB
Name
(GenBank) Holliday junction DNA helicase
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
smc  Streptococcus mutans NN2025 (serotype c)
Pathway
smc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SmuNN2025_0052 (rubB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smc03400]
    SmuNN2025_0052 (rubB)
Enzymes [BR:smc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SmuNN2025_0052 (rubB)
DNA repair and recombination proteins [BR:smc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SmuNN2025_0052 (rubB)
    RecFOR pathway proteins
     SmuNN2025_0052 (rubB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_14 Mg_chelatase Sigma54_activat nSTAND3 AAA_3 AAA_16 DUF815 AAA_18 ResIII Rad17 RNA_helicase NTPase_1 bpMoxR TsaE IstB_IS21 AAA_17 NB-ARC AAA_25 AAA_24 Sigma54_activ_2
Other DBs
NCBI-ProteinID: BAH87078
LinkDB
Position
63594..64589
AA seq 331 aa
MTRILDNEPMGDEEFAERTLRPQYLQEYIGQDKVKDQLKIFIKAAKQRDEALDHVLLFGP
PGLGKTTMAFVIANELGVNLKQTSGPAIEKAGDLVAVLNDLEPGDVLFIDEIHRLPMAVE
EVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEY
YTDIDLTEIVERTADIFEMTITHQAALELARRSRGTPRIANRLLKRVRDYAQIMGDGLID
DKITDKALTMLDVDHEGLDYVDQKILKTMIEMYHGGPVGLGTLSVNIAEERETVEDMYEP
YLIQKGFIIRTRSGRVATAKAYEHLGYRYTE
NT seq 996 nt   +upstreamnt  +downstreamnt
atgactagaattttagataacgaacctatgggtgatgaggaatttgcagaacgcacactt
cgtccgcagtatttacaggaatatattggtcaggataaggttaaagaccagctgaagatc
ttcatcaaagcagctaaacaacgtgatgaggctttggatcatgtccttttatttggtcct
cctggccttggtaagaccaccatggcttttgttattgccaatgaattgggggttaatctt
aagcaaaccagcggtccagctattgaaaaagctggtgatttggttgctgttttaaatgat
ttagagcctggggatgttctttttattgatgaaattcatcggctgcctatggctgttgag
gaagttctttatagtgccatggaagatttttatattgacattatgattggtgcaggagaa
acttctcgcagcgtgcatttggatttgccgccttttactttaattggggcgacaacacgg
gcaggtatgttgtcaaatcctttgcgggcgcgttttgggattacaggtcatatggaatat
tatacagatatcgatttaactgaaattgttgagcgaacagcggatatttttgagatgacc
attacccatcaagctgcgttagaattagcacggcgttcccgtgggactccgcgtattgct
aaccgactcttaaaacgtgtccgagattatgcccaaattatgggagatggtcttattgat
gataaaataacagataaagctttgaccatgcttgatgttgatcatgaaggccttgattat
gttgatcagaagatccttaagacgatgattgagatgtaccatggcgggcctgttggtctg
gggactctgtcagttaatattgccgaggaacgtgagaccgttgaagacatgtatgagccc
tatcttattcaaaagggatttatcatacggactcgcagtggacgtgtagccactgccaaa
gcttatgaacatttgggttatcgttacacagaataa

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