Streptococcus mutans NN2025 (serotype c): SmuNN2025_0052
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Entry
SmuNN2025_0052 CDS
T01185
Symbol
rubB
Name
(GenBank) Holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
smc
Streptococcus mutans NN2025 (serotype c)
Pathway
smc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SmuNN2025_0052 (rubB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smc03400
]
SmuNN2025_0052 (rubB)
Enzymes [BR:
smc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SmuNN2025_0052 (rubB)
DNA repair and recombination proteins [BR:
smc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SmuNN2025_0052 (rubB)
RecFOR pathway proteins
SmuNN2025_0052 (rubB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_14
Mg_chelatase
Sigma54_activat
nSTAND3
AAA_3
AAA_16
DUF815
AAA_18
ResIII
Rad17
RNA_helicase
NTPase_1
bpMoxR
TsaE
IstB_IS21
AAA_17
NB-ARC
AAA_25
AAA_24
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
BAH87078
LinkDB
All DBs
Position
63594..64589
Genome browser
AA seq
331 aa
AA seq
DB search
MTRILDNEPMGDEEFAERTLRPQYLQEYIGQDKVKDQLKIFIKAAKQRDEALDHVLLFGP
PGLGKTTMAFVIANELGVNLKQTSGPAIEKAGDLVAVLNDLEPGDVLFIDEIHRLPMAVE
EVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEY
YTDIDLTEIVERTADIFEMTITHQAALELARRSRGTPRIANRLLKRVRDYAQIMGDGLID
DKITDKALTMLDVDHEGLDYVDQKILKTMIEMYHGGPVGLGTLSVNIAEERETVEDMYEP
YLIQKGFIIRTRSGRVATAKAYEHLGYRYTE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgactagaattttagataacgaacctatgggtgatgaggaatttgcagaacgcacactt
cgtccgcagtatttacaggaatatattggtcaggataaggttaaagaccagctgaagatc
ttcatcaaagcagctaaacaacgtgatgaggctttggatcatgtccttttatttggtcct
cctggccttggtaagaccaccatggcttttgttattgccaatgaattgggggttaatctt
aagcaaaccagcggtccagctattgaaaaagctggtgatttggttgctgttttaaatgat
ttagagcctggggatgttctttttattgatgaaattcatcggctgcctatggctgttgag
gaagttctttatagtgccatggaagatttttatattgacattatgattggtgcaggagaa
acttctcgcagcgtgcatttggatttgccgccttttactttaattggggcgacaacacgg
gcaggtatgttgtcaaatcctttgcgggcgcgttttgggattacaggtcatatggaatat
tatacagatatcgatttaactgaaattgttgagcgaacagcggatatttttgagatgacc
attacccatcaagctgcgttagaattagcacggcgttcccgtgggactccgcgtattgct
aaccgactcttaaaacgtgtccgagattatgcccaaattatgggagatggtcttattgat
gataaaataacagataaagctttgaccatgcttgatgttgatcatgaaggccttgattat
gttgatcagaagatccttaagacgatgattgagatgtaccatggcgggcctgttggtctg
gggactctgtcagttaatattgccgaggaacgtgagaccgttgaagacatgtatgagccc
tatcttattcaaaagggatttatcatacggactcgcagtggacgtgtagccactgccaaa
gcttatgaacatttgggttatcgttacacagaataa
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