Sinorhizobium medicae: Smed_0002
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Entry
Smed_0002 CDS
T00555
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Smed_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smd03032
]
Smed_0002
03036 Chromosome and associated proteins [BR:
smd03036
]
Smed_0002
DNA replication proteins [BR:
smd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Smed_0002
Chromosome and associated proteins [BR:
smd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Smed_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ABR58862
UniProt:
A6U5D2
LinkDB
All DBs
Position
1405..2850
Genome browser
AA seq
481 aa
AA seq
DB search
MRHDALFERVSARLKAQVGPDVFASWFGRLKLHSVSKSVVRLSVPTTFLKSWINNRYLDL
ITSLVQQEDSEILKVEILVRTATRGHRPAAPEETVSAAVETVPVASVRRSATSPSVAISA
STVAAAPARPHQTPLFGSPLDQRYGFDSFVEGSSNRVALAAARTIAEAGAGAVRFNPLFI
HSSVGLGKTHLLQAIALAALQSARAPRVVYLTAEYFMWRFATAIRDNDALSLKESLRNID
LLIIDDMQFLQGKSIQHEFCHLLNMLLDSAKQVVVAADRAPWELESLDSRVRSRLQGGVA
IEMEGPDYEMRLEMLKRRLEAARQDDATLEIPLEILSHVARNVTASGRELEGAFNQLLFR
RSFEPQLSIERVDELLGHLVNAGEPRRVRIEDIQRVVAKHYNVSRQELVSNRRTRVIVKP
RQIAMYLSKTLTPRSFPEIGRRFGGRDHTTVLHAVRKIEELISGDTKLSHEIELLKRLIN
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatgacgcactcttcgagcgggtaagtgcgcgtttgaaagcccaggtcggaccg
gatgtcttcgcgagttggtttgggcgcctcaagcttcattcagtgtcgaaaagcgtcgtg
cgcctctcggtcccgacgacctttctgaagtcctggatcaataatcgttatctcgatctg
atcacctcgctcgtccaacaggaggacagcgagatattgaaggtggagatcctggtgcgc
accgccacccgcggacatcgtccggcggctcctgaagagacggtttctgccgcggtggag
acggtgcccgtcgcttctgttcgccgttctgcgacatccccttcggtggcgatctctgcc
tcgaccgttgcggcagctccggcgaggccccatcagacgccgcttttcgggtcgccgctt
gatcagcggtacggtttcgatagtttcgtagagggttcctccaatcgggtcgcgctcgcg
gcagcgcgtacgattgccgaggccggcgccggcgccgtgcgcttcaatcctcttttcatt
cattcgagcgttggcctcggtaagacccatctgctgcaggcgatcgcgctggcggcgctc
cagagtgcccgggcgccgcgcgtcgtttatctgacggccgaatatttcatgtggcgtttc
gcaacggcaatccgcgacaatgatgcgctctcgttgaaggagtcgcttcgcaacatcgac
cttctcatcatcgacgatatgcagtttctacagggcaagtcgatccagcacgagttctgc
catctcctgaacatgctgctcgactccgccaaacaggtggtcgtcgccgcggatcgcgcg
ccgtgggaattggaatcgctcgacagccgcgttcgctcgcgccttcagggaggtgtcgcg
atcgagatggaagggccggactacgaaatgcgcctggaaatgctgaagcgccgcctcgaa
gcggcgcgccaggacgatgcgacactcgaaattccgctcgagatcctgagccacgtcgcc
cgcaacgtaacggccagcggccgcgagctggagggagctttcaatcagcttctcttccgc
cgctccttcgagccgcagctttcgatcgagcgggtcgatgaactgctgggccatctcgtc
aatgccggcgaaccgcgccgggtccgcatcgaggacatccagcgcgtcgtggccaagcat
tacaacgtctcgcgccaggaactggtttcgaaccgccgcacccgcgtgatcgtcaagccg
cgccagatagccatgtatctgtccaagacgctgactccgcgttcctttccggagatcggc
cgccgcttcggcggacgcgaccatacgaccgtgctccacgcggtgcgcaagatcgaagag
ctgatttcgggcgacaccaagctcagccatgagatcgagctgttgaagcgcctgatcaac
gaatag
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