Sinorhizobium medicae: Smed_0495
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Entry
Smed_0495 CDS
T00555
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
smd
Sinorhizobium medicae
Pathway
smd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Smed_0495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smd03400
]
Smed_0495
Enzymes [BR:
smd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Smed_0495
DNA repair and recombination proteins [BR:
smd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Smed_0495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF1184
RL10P_insert
Motif
Other DBs
NCBI-ProteinID:
ABR59351
UniProt:
A6U6S1
LinkDB
All DBs
Position
complement(539445..539696)
Genome browser
AA seq
83 aa
AA seq
DB search
MNNTAQQDVSALSFEQAVEELERIVSALERGDVALDKSIEIYERGEALKKHCEALLKAAE
DRIEKIRLDRAGRPQGVEPLDAE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaccgcgcaacaggacgtttccgctctctctttcgaacaggcagtcgaggag
ttggagcgcatcgtttcggcgcttgagcgcggcgacgtcgcgctcgacaaatcgatcgag
atctacgagcgcggcgaagccctcaagaaacattgcgaggccttgctgaaggcagcggaa
gaccgtatcgagaaaattcggctggaccgcgcgggccgaccgcagggcgtcgagccgctc
gacgcggagtag
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