Sinorhizobium medicae: Smed_1397
Help
Entry
Smed_1397 CDS
T00555
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_1397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_1397
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Smed_1397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABR60243
UniProt:
A6U9B3
LinkDB
All DBs
Position
1472542..1474362
Genome browser
AA seq
606 aa
AA seq
DB search
MKLRAVLSGLVMLVAASIFANGALAAPVHAIAMYGEPALPADFKHFPYVNPEVKKGGRIA
YGVVGTFDNLNPFILKSMRTTARGMWDPGFGNLVHESLMQRSQDEPFTMYGLLAETVEWD
DDRTFIQFNLNPKARWADGQPVTAEDVIFTFELMRDKGRAPFSNRLSKVAKMEKVGERSV
RFTFTEDADREVPLLLGLSPVLPKHAVDVEAFDRTSLKPPLGSGPYRVAEVRPGERIVYR
RNPDYWAKDLPSKVGLDNFDEISVEYFLQENTLFEAFKKGVVDIYPEGSATKWARAYDFP
AVRSGDVIKETFKPKTPSGMLGFVFNTRRPVFDNIKLRQGLALVFDFEWVNKNLFDGAYT
RTQSYWQNSSLSFLGVAADNRELDLMGDVRERINPAILDGSYRLPVTDGSGRDRNVLREA
VTLLREAGYSIKDGKMVDGNGTPLAFEIMSQNAGQEKIALAYQRFLAPLGIVARVRTVDD
SQYQLRSQSFDYDVIIKSFPSSLSPGLEQINRWSSRTRDRQGSDNFAGVADKDVDKLINN
ILQARNPDDFTAAVRAHDRLLVNNSYVVPLYHLDAQWIARWKRIGRPTAEPLYGYQLPSW
WDERVQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttgcgcgcagttctttccggcctggtgatgctcgtggcagccagcatatttgcc
aacggtgctttggccgcgcccgtgcatgcgatcgccatgtatggcgaaccagccttgcca
gccgacttcaagcacttcccttacgtcaacccggaggtgaagaaaggcgggaggattgcc
tatggcgtcgtcggcacgttcgacaacctcaaccccttcatcctgaagagcatgcgcacg
actgcgcgcggcatgtgggatcccggtttcggcaatctggtccacgagtccctgatgcag
cgctcgcaggacgagcccttcaccatgtatggcctgctcgccgagaccgtcgaatgggac
gatgaccgtactttcatccagttcaacctcaatcccaaggcgcgctgggccgacggtcag
ccggtaaccgcagaagacgtgatcttcaccttcgaattgatgcgcgacaaaggtcgcgca
cccttcagcaaccgcctctccaaggtggcgaagatggaaaaggtcggggagcgaagcgtg
cgcttcactttcaccgaggatgccgaccgagaggttccgcttttgcttgggctttcaccc
gtgctgccgaaacatgcggtcgacgtcgaggcgttcgatcgaacgagcctcaaaccgccg
ctcggctccggcccttaccgcgtcgcggaagtcaggcccggagaacgaatcgtctatcgc
cgcaatcccgattattgggccaaggatctgccgtccaaggtcggtctcgacaatttcgac
gagatctcggttgagtactttcttcaggagaacacgcttttcgaagccttcaagaagggc
gtcgtagacatctatccggaaggaagcgccaccaaatgggctcgcgcctatgatttcccc
gcggtccgcagcggcgacgtgatcaaggaaacattcaagccgaagacgccctccggaatg
ctcggctttgtcttcaacacgcgcaggcctgtattcgacaacatcaagctcagacagggc
ctggctctcgtcttcgacttcgagtgggtcaacaagaacctcttcgacggtgcctatacc
cgcacgcaaagctactggcagaattcgtcgctttccttcctgggcgtagcagccgacaat
cgtgaacttgacctcatgggagatgtcagggagcgcatcaatccggcgatcctcgacggc
agctataggctccccgttacggacggctcgggtcgcgatcgcaacgtgcttcgggaggca
gtgacgctgctgcgtgaagcgggctactcgatcaaggacggcaagatggtcgatggcaac
ggcacgccgcttgctttcgagatcatgagccagaatgccggacaggagaagatcgccctc
gcctaccagcgctttctggccccgctcggcattgttgcaagggttcggacggtcgatgat
tcgcaatatcagttgcgcagccagtccttcgattacgacgtcatcataaagtcgtttccg
tcgtcgctctccccgggtctcgaacagatcaaccgctggagctcgcgaacacgggacagg
caaggtagcgacaatttcgccggggtcgccgacaaggacgtcgacaaactgatcaacaac
atactccaggcacgaaaccccgatgatttcaccgccgccgttcgcgcgcacgaccggctg
ctggtcaacaattcctatgtggttccgctttaccacctcgatgcgcaatggatcgcccgg
tggaagcgtatcggccggccaacggctgagccgctctatggctatcagttgccgagctgg
tgggacgagcgggtccagtaa
DBGET
integrated database retrieval system
