Sinorhizobium medicae: Smed_1469
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Entry
Smed_1469 CDS
T00555
Name
(GenBank) aminotransferase class V
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00730
Thiamine metabolism
smd01100
Metabolic pathways
smd01240
Biosynthesis of cofactors
smd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Smed_1469
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Smed_1469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smd03016
]
Smed_1469
03029 Mitochondrial biogenesis [BR:
smd03029
]
Smed_1469
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
smd02048
]
Smed_1469
Enzymes [BR:
smd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Smed_1469
Transfer RNA biogenesis [BR:
smd03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
Smed_1469
Prokaryotic type
Smed_1469
Mitochondrial biogenesis [BR:
smd03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Smed_1469
Prokaryotic defense system [BR:
smd02048
]
DNA phosphothiolation system
Sulfur modification proteins
Smed_1469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABR60314
UniProt:
A6U9I4
LinkDB
All DBs
Position
complement(1552027..1553235)
Genome browser
AA seq
402 aa
AA seq
DB search
MPIDAIGRGSGKGSMSGSRIYMDWNATAPLLPEAREALVSALDHLGNPSSVHGEGRAVRA
LVESARRDIAALCGAQAAAVVFTSGATEAANMVLTPEFRMGRTPLKAGKLYVSAIEHPAV
REGGRFSRDNTCEIAVTSAGIIDCAALETQLQAHDRETGLPMVAVMLANNETGVVQPIAD
VAAIVRAHGGILVVDAVQAAGRLPLSIEALGADFLILSSHKIGGPKGAGALVARGEIMMP
SSLIRGGGQEKGHRSGTENAAALAGFAAAARAAARDIDGRMAAVAAMRDSLEMKMRSSAP
DVIIHGQSVSRLANTCFFTLPGLKAETGQIAFDLEGVALSAGSACSSGKVGQSHVLTAMG
YDPRQGALRISIGEATTQVEIERCAAIFAKVAARRPSTGQAA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatcgatgcgatcggccgaggctctggtaaaggatcgatgtcgggatcgcgcatc
tatatggactggaacgccacggcgccgcttctgcccgaagcgcgcgaggcgctcgtgtcc
gcgctcgatcatctcggcaatccttcttctgttcacggcgaggggcgtgctgtccgggct
cttgtcgagagcgcccggcgcgatattgccgcgctctgcggcgcgcaagccgcggcggtc
gtcttcaccagtggcgccacggaagcggcgaatatggtgctgacgccggagtttcgcatg
gggcgcacgccgctgaaggcggggaagctctatgtttcggcgatcgagcatccggcagtt
cgagagggcgggcgcttctcgcgcgataatacttgtgagatagcggtgacaagcgccggg
atcatcgactgcgcagcgctcgaaacccagctgcaggcgcatgaccgtgagaccggtcta
cccatggtggcggtcatgcttgccaacaatgaaacgggcgttgtccagccgatcgcggac
gttgcggccatcgtgcgcgcgcatggcggcatactggtcgtcgatgcggtgcaggcggcc
gggcgcctcccgctttcgatcgaggcgctcggtgcggatttcctcatcctgtcgtcgcat
aagatcggcggaccgaagggggccggcgccctcgtcgcccgaggcgaaatcatgatgccg
tcttccttgatccgcggaggcggacaggaaaagggacatcgttcggggaccgagaatgca
gcggcactggcgggctttgcggccgcggcccgcgccgccgccagggatatagatgggcgg
atggccgctgtcgccgcaatgcgcgacagtctcgaaatgaaaatgcgatccagcgcgcct
gacgtgatcatccatgggcagagcgtttcgcgcctcgcaaatacgtgcttctttaccctt
ccaggcctcaaggcggaaacggggcagatcgcattcgatctcgagggcgtcgccttgtcg
gcaggttcggcctgttcatccgggaaggtcgggcaaagtcacgttctgacggctatgggc
tacgatccgcgacagggcgcgctcaggatttcgatcggcgaagcgacgacgcaggtggaa
atcgagcgctgcgccgcgatattcgcgaaagtggcggcgcggcgaccctcgaccggacag
gcggcctga
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