Sinorhizobium meliloti Rm41: BN406_04199
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Entry
BN406_04199 CDS
T02332
Symbol
nodD2
Name
(GenBank) Nodulation protein D 2
KO
K14657
LysR family transcriptional regulator, nod-box dependent transcriptional activator
Organism
smi
Sinorhizobium meliloti Rm41
Module
smi_M00664
Nodulation
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smi03000
]
BN406_04199 (nodD2)
Transcription factors [BR:
smi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BN406_04199 (nodD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
CCM70481
LinkDB
All DBs
Position
pSYMA:692810..693742
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AA seq
310 aa
AA seq
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MRFRGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGREL
IPTPRAEALAPAVRDALLHIQLSVIAWEPINPAQSDRRFRIILSDFMTLVFFERVVERLA
REAPGVSFELLPLDDDPYELLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCPTNEQ
LLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLLPHTN
RIAIIPLRLVKYFEQAIPLRIVKHPLPSLWFTEAVQWPALHNKDPGNIWMREILLQEASR
SEFQGETSLE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaggggcctagatctaaacctcctcgtcgcgctcgacgcactgatgaccgag
cgcaaactcacggccgccgcacgcagggtcaagctcagtcaaccggccatgagcgcggct
atcgcgcgcctgcgcacctattttggcgacgagctgttttcgatgcagggccgcgaactt
atcccgacaccgcgtgccgaggcgcttgccccagccgtgcgcgacgccctgctgcacatt
cagctctccgtcattgcttgggaaccgatcaacccagcccagtcggatcgccgtttcagg
atcattctttcggacttcatgacactcgtattctttgagagggttgtggagcgcttggct
cgggaggctcctggcgtcagcttcgagttgctgcctctagacgacgatccctatgagctt
ctccggcgcggtgatgtcgattttttagttcttccggacttgttcatgtcgagtgcgcac
cccaaagcgaagctgtttgccgaggcactcgtgtgcgtcggctgcccgacgaatgagcag
ttgctaggggaactctctttcgagaaatacatgtcgatggggcatgttgcagcgcagttc
gggcgtgcgttgaagccctccttcgagcaatggctattactggagcacgggttcaagagg
cgtgtcgaacttgtcgtgccaggttttactttgattccgccgttgctgccgcacaccaat
cgtatagccattatcccattgcgtctggtcaagtatttcgaacaagcgatacccctgcgg
atcgtcaaacacccgctgccatccctctggttcactgaggctgtccagtggcccgcacta
cacaacaaggatcccggaaatatctggatgcgggagatacttctgcaggaagcctcgcgc
agcgaatttcagggagaaacgtctttagagtga
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