Breviolum minutum: v1.2.040391.t1
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Entry
v1.2.040391.t1 CDS
T04349
Symbol
symbB.v1.2.040391.t1
Name
(OIST) -
Organism
smin
Breviolum minutum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RVT_1
Exo_endo_phos
RNase_H
IFT57
Motif
LinkDB
All DBs
AA seq
3295 aa
AA seq
DB search
MAWQKRRPAGWIVSISGFLAARRYHGSTTSRCEMDKQRDVKVDLRYVRDGACGRRMTLAP
VVVKNARALPTPCRLQGEGFQVVAFHTEMKEPKLGGLREDRGCVFLETFFFNNRASTLGA
NLQMSTMWTCRFCHVKHTCAQAHCEACNRHWKQADAATGPRSQSRRSRRTTRTNQERKKT
ANPNSNTNVNPDVHTEKPEDEELFTSKLPWVTSSPHGQAVPNESAKQSNEDGNNAMPVPP
EPKSSTVLGGPAADEDVMKLHQHLKAVKATLGSLPEELEQKLMACEEKLREKALTHGHLN
KLGKLNKQMKSLLTKLKDMDEGWQQFAQKVATKFDHHRKLYHTSREAIMQEYLAKSQELQ
AAKEEVQVASQHLFSEQPVAPMVEQVDSTAQLLEQAIQEDAIFDEYLAPGSNSAVRKESA
LITNEGGQSPPQSKRGGKGQDISSSQMNVEAWGSQQAIDMDLQGLLDSGPCLFSRHSGSL
VGFENSLNVTNHGWQCRGLDTAQFCLAETRSPTCSFSDDDSPCPSDRWCEDSGFEMSTVD
FRTCHKPRLYRGLQSKSVSFETTVDVFGFDPASPADAFPEEWWVDEVEPLVPASHHASHK
YQVSNVAPLDPYSEFWADWGFFWKPVQQIIDSNGPILPRGGELGRVDEYDNDSFEHVGSW
KEHRNEGGLAAAIQDPRLTNPRVYAPEVPADDESDDDLGVTFYRWVDVIQVTDLHPYRLG
GSIPFITYGLRRHHLGRRDFSSPDLLPGRIKELVWNLWQDEVGRFEPVVIHFIRPQPVRE
LGADGVIILLIEILCDEIPPGSSPALAVTCDTSHRLMDSPKALYVDRAVDVPSLMPHIGL
SYLCAPRGFRQCMFTVASALIGAYLTPVPAGALIKLVISDKLRIFAHAFEWFPDLERFAS
VVREQVRRGLQDHELVVHCSNAPSKSFGFRIGQLLVPPQLRASIQQLCGREIKACYPVDH
GALNAMLGGGSEAFHAMVYLHEQPLDHAFLVVTGGHDMHHGLDRRRVVFCLRDAFSDLEA
LHIFLTGGDQGASADIFTFQHDGNLVHDLHAIPFGSVILHSVTLTPSDDDHMDCVEDAAG
SEDVFEDEVPSDDSLSLIQTKAKLKSIQLLQFGQPTHELLVQSDFEDIERCTIVAQFPVR
FREALEWSDRFEVQCGTQKYDAELLIEPLRPDGCSDTICECVWTAWWKAWDFTLSDDKIF
TFVSQVDDTHRRFDVVACDVDQACAQIAEVFVDPIQFTNVPWDPNHLEPCRHLYMVTQFN
PDSTVWPALFVLESPNGHQVWQVCHLDVCQPLQAVHHRFPQAKHFTLFGNGRALTFEVSM
EAPGICICCKTGNRHDSDTVFSFTEGMQKLLHWLSFATEPAVPVAGKSGGEGGAAPCLYD
RWCAAPQSHASSSQRARLVFCGDQVGGPDYTEDNLDLCSDRHDQSGTSDASSAIPTDFSS
VPQPYIEHKQPNAILQALHQEMLKLCNSNWVGFNQDFAHLPVTHPAAQCALAVAQTHCIS
HSVLHVYTDGSCKGSGSAWVFVVVAQTFTAYGPTFWKVGYAADILDETIGPFQHTAMDAE
ATALIAAVEFLLPLVSLEQDVHFHFDALSVGFGAFGKHATPTYHGNTSSRQHNARVMLSF
LQHQSRAHPVHVHAHEGNPFNELADSIATAVRLGWRPPQQPRLCSGPVLQHPCRDWAWLY
FVSPTIVPPLPFLLDNKPGHFRKLAGDAQLHSPVDIEAPPMLYGTLQIVSANVATMEYGV
DGVPFSHKCRFLMDAFEKASFDVVAVQESRARHSETRTDGHYIRLISAGHQANAGVELWF
LKNGFWAAGGVDLAPDDFVVWYNNPRVLMADIHWGRSTITFCVAYAPQSGQTEDLITSWW
NELSVQLDKIPKEQPLFLLGDLNCHIGSVGTDAIGPLAPDIENGAGGRLRQLCSQHQLII
PATYSQWHDGSSHPYVHPKGSRHRLDYIVVRQMQQHAICRSWVAQDIELANGQCDHLPVA
LSLQVQLKPSAHHGFQRRAVYNRTKARESLQQTTFPPLTITQIPWETDVNDHWHLARDEL
QVQARKAFPFEKRVQRQQYFDKATWDAMCHRKSLRQEHRALQRDIDGHVLRMVFKAWRTG
GPPCDEVQAGQFHLHTQCLQDALYVMQRTQCDQRFRAHKKQAWKQWALDMGEKLQHDLQQ
GDVFRVLKPKRALAKSKKRALPGLRATNGTWCQGRTDIAVAWERQFGDLENAQAVQLKQL
LDKQFEVQMLPKPQAPGVDGLGAELFRQDPVCMARQLYPMLLKAAFRQQWVVEMSGGWLL
PLWKRKGNPQQMQYYRGILLEPVLGRIISRAWRKKMCPTISTWAAPMQYGGRAGLSIEAL
HLQARMWQAHAKTQRHNLAIIFVDIKAAFYTIAKPLLCNSNLTRAELEQFVSTLGFPDTA
AWRATLSHSWFVIPNGTSIMAPQTGSRPGDPLADLLFSMVMSHVLHEINFRLTAVAHAVE
GDSDKPIVENVTWVDDIALAVTSTADGFIDRVILVLQTVVDVMAEHGLTLSFGQGKTAVM
LSFNGRCAAQAKRQCEEQYHGELVFLTEHFGLTRVPIVQHYRHLGGFLVRHGVVLPEIKI
RVSQAITNLQPVRSVLRDERVALEKRRRLLHGLGMSVATLHTGTWFHLDKGEQQAWHAGI
QRIYSLLAVRGTDGSFPHINKFEAALKAGYVEADELLHIQRLRLFIQVLRIGDEHMIQAV
LNNYAIMDDRAWLSEVQRAWSWVIHSRGDDDLQEIEFSSFLTLQGWKTYQSQWRMMKKWL
KQAIRGHCVHMKTHAAIKAADDEQRGLLLEHGWLHQDTSPQSANEDEPPDEHPCPTCGFK
AATAAGLAVHQHRLHGARIAMRRYAIDGICRICAKNFCTRPRLLQHLHAGTTDCWWKHCR
LYQPLTVEEAQALDNQDCASKQAHHQRGLRDETQDRACHSCNLDGLPMLSSTGSTACGPP
SADELSHWASVGLLPPGRGGRQRTQRPRAQASKFNIQERSTQIEEQLVCDAKNWDAPVSI
PRPLVMDTKYILIFFSGHRRWGDIASWVSWLGIDNSIIPISVDIGLHAVYGDIYNGQLWE
RLIRARKVVAAHGGPPCETYSLARWLPAPSGRPRPLRNRKFPWGIPARSLKEVQQCVVGT
VLMFRTIYLLILVYCYGGAITMEHPAGHKCMQEQWCIWLAGMIQRLLRAPDVETIQFLQG
PLGQPFSKPTKLLIGRLPLLQRHLYAAYDVGWRSTVTLGGLDSDGWKTAAAKSYPSKLCE
VLARSYLWYADRVPTSGQEDDPPQLAMAKEVLCNWDPYTGSTMSFFRDYHTRPDG
NT seq
10068 nt
NT seq
+upstream
nt +downstream
nt
ttacatcaccgcggttggccttcccatggcctggcaaaaacgtcgtcctgccggatggat
cgtcagcatcagcggtttccttgcggcccgccgctaccacggttccacgacgtctcgatg
tgagatggacaagcagagagatgtgaaggtcgacttgcgctatgtgcgagatggtgcttg
tggcaggagaatgaccctggcacccgttgtggtgaagaatgctcgagcgttgccaacgcc
ctgcagacttcaaggggaaggttttcaagtcgttgccttccatacagaaatgaaggagcc
aaaacttggcggtttgagggaagatcgtggctgtgtttttttagagacattcttcttcaa
caaccgcgcctcaacattaggtgccaatctccagatgtcaacgatgtggacctgcagatt
ttgccacgtgaagcacacctgtgcccaagctcattgcgaagcatgcaatcgacattggaa
gcaggcagatgcagcaactggcccgagatctcagagtcgcagaagcagaaggacaacaag
gacgaatcaagaaaggaagaagacagcaaaccccaattcgaataccaacgtgaatcccga
cgttcacaccgagaagccggaagacgaggagctcttcacgtccaagctcccatgggttac
aagttctccacacggacaagctgtccccaacgaatcggcaaagcaatccaacgaggatgg
caacaatgcaatgccagtgccaccggaacccaagtcgtcgacagttcttggtggcccagc
agcggacgaagatgtgatgaagttgcatcagcatctcaaagcagtcaaggctactttggg
ctcgttgccagaagagttggagcagaagttgatggcgtgcgaagagaaacttcgcgagaa
ggctttgacacacggccacctcaacaagttaggcaaattgaacaagcagatgaagagcct
ccttaccaagttgaaggacatggacgaaggctggcagcaatttgcacagaaggtcgcgac
caaattcgatcatcacagaaagctctaccacacgagcagggaagctatcatgcaggagta
cttggccaagtcgcaggagctacaagctgccaaagaagaagtgcaagtggcttcacaaca
cctcttctcggagcagccagttgcaccaatggtagagcaagtggactccaccgcacagtt
gttggagcaggccatccaggaagatgccatcttcgacgagtacctagctccaggcagcaa
ttcagccgttcgcaaggagagtgcactcatcaccaacgaaggtggccaatctccacctca
aagcaaaagaggtggaaaagggcaagacatctccagctcccaaatgaatgttgaggcttg
gggatcacagcaagccattgatatggatttgcaagggcttttggacagtggcccttgttt
gttttccaggcattccggttctcttgtgggatttgagaattcgttgaatgtcacaaatca
tggttggcaatgcagaggcttagacaccgcacagttttgccttgctgaaacaagatcacc
cacatgtagcttctctgacgatgactccccatgtccgagtgaccgctggtgtgaggattc
gggatttgagatgtctactgtggatttccgtacttgccacaagcctcgtttgtatagagg
gttgcagtccaagtcggtcagttttgaaactacggttgacgtttttgggtttgatccggc
ttcccctgccgatgctttccctgaagaatggtgggtggatgaagttgagccattggttcc
agcttcccatcacgcaagtcataaatatcaggtgagtaatgttgcgccccttgatccata
ctctgaattttgggctgattggggttttttctggaagccagttcaacagatcattgattc
gaatggtccaattttgccgaggggtggcgaacttgggcgtgttgatgagtatgacaatga
ttcttttgaacatgttggctcatggaaagagcatcgaaacgagggtggacttgcagcagc
aatacaggaccctcgtcttacaaatcccagggtatatgctccggaagtccctgcggatga
tgaatcagatgacgacctcggcgtgacgttttaccgttgggttgatgtaatccaagtgac
ggatcttcatccatatcggcttggaggctccatacccttcataacgtacggcctcaggcg
acatcacttgggacgcagagatttttcttcaccagatttgcttcctggcaggatcaaaga
attggtgtggaacctttggcaggatgaagttggcaggttcgagccagttgtcattcactt
catacgccctcaaccagtgagagagctcggagctgacggggtgatcatacttctcatcga
gatcctttgcgatgagattccgccagggtcgtcaccagcattagctgtcacgtgtgacac
tagccacaggttgatggacagtcccaaagctctttatgtggatcgagcggtcgatgttcc
gtctttgatgcctcatattggtttgtcgtacctatgtgcgccaagaggcttcagacaatg
tatgttcacggtggcttcggccctcatcggtgcctacctcacaccggtcccggcaggcgc
cttgatcaagctggtcatcagtgataagttgcgcatatttgcacatgcctttgagtggtt
ccctgatctagagcgatttgcttcggttgtgcgagagcaagttcgtcgtggactccaaga
ccatgagttggttgtacattgcagtaatgctccgtcaaagagttttggattccgcattgg
gcaactcttggttccaccacagttacgtgccagcattcagcaactctgtgggcgcgaaat
taaggcttgctaccctgtggaccacggggctctcaacgccatgcttggaggcggcagtga
agcttttcatgccatggtttatctccatgaacaaccgttggatcacgctttcttggtggt
tactggtggacatgatatgcaccacggtttggacaggagacgcgttgttttctgcctcag
ggatgcatttagtgacctggaagcactccacatcttccttactggaggcgaccaaggagc
tagtgccgacatcttcacgtttcaacatgatggaaacctggtgcatgatttacacgccat
cccgttcggttctgtcatcttgcattcagtgactcttacacccagtgacgatgaccatat
ggactgtgttgaggatgctgcagggtcggaagatgtttttgaagacgaagtgccttcaga
cgatagtctttcattgatacagaccaaagccaaattgaaatccattcagctcttacaatt
tggtcagcccactcacgagttgttggtacagagtgacttcgaggacattgagagatgcac
catcgtggctcagtttcctgtccgttttagggaggctcttgaatggagtgatcgctttga
agtgcaatgtggcacgcagaaatatgatgctgagttgttgatcgaaccgttgaggccgga
tggatgctctgataccatctgcgaatgtgtctggactgcatggtggaaagcatgggactt
cacgttgagtgatgacaaaatcttcacctttgtgagtcaggttgatgacacgcacaggcg
ttttgatgtggtagcgtgtgacgttgatcaagcttgtgctcagattgcggaggtttttgt
ggatccaattcagttcaccaatgttccatgggatccgaatcatttagaaccatgccgaca
cttgtatatggtgacacagttcaatcctgattctactgtatggcctgctttgtttgtcct
tgaatcaccaaatggacaccaagtttggcaagtttgccacctcgatgtttgccaacctct
acaagcagtgcatcatcggtttccccaggcgaagcattttacgttgttcggcaatggacg
tgctctcacctttgaagtttccatggaagcaccaggtatatgcatttgctgtaagacagg
taatcgccatgactctgacacggttttttccttcactgaagggatgcagaagctgctgca
ttggttgtcctttgctacagagccggccgttcctgtggctggaaaaagcggaggggaagg
tggtgctgccccatgtctgtatgaccgctggtgtgcagctcctcagtcccatgcttcttc
cagtcagcgggcacgtcttgtgttctgtggagaccaggttggtggtcccgattacacaga
ggataacttggatctctgctctgatcgccacgaccagtctggtacatccgatgcatcatc
tgccatccctactgacttttccagtgtaccacagccatacatagagcacaagcagcccaa
tgccatcctacaagcgctgcatcaagaaatgctcaagttatgcaacagcaattgggttgg
ttttaaccaggactttgcgcaccttccggtgacacacccagcagcacaatgtgctttggc
agttgcgcagacacattgcatttcccactcggtattgcatgtctacactgatggttcatg
taaaggttctggtagcgcttgggtttttgtggtagtggcacagaccttcacggcctatgg
acccactttttggaaagtaggctatgctgctgacatcctagatgagaccattggtccttt
ccaacatacagccatggatgctgaagccacagcgttgattgcggcggttgaattcctcct
cccattggtctctttagaacaagatgttcatttccatttcgacgcattgtcagttggttt
tggggcctttggcaaacatgcgactccaacttatcatggcaatacatcttcacgccagca
caatgccagagttatgctgtcattcttgcagcaccaatcacgggcacatccggtgcatgt
acatgcacatgaaggcaaccctttcaacgaattggctgacagcatagctactgctgtgcg
tttggggtggcgaccacctcaacagccccgtttgtgcagtggccctgtccttcaacatcc
ttgtcgtgattgggcatggctgtattttgtttcgcccactattgttcctccgttgccttt
cctattggacaacaagccagggcatttccgcaaacttgctggtgacgctcaacttcactc
tccagttgacattgaagcaccgccaatgctctatggtacattgcagattgtctctgccaa
tgtcgctacgatggagtatggtgtagatggtgtccctttcagccacaaatgccgatttct
gatggatgcttttgagaaggcttcatttgatgtggtggcggtacaggaatcaagggcacg
gcattctgaaacacgcactgatggtcattacatccggctcatcagtgccggccatcaagc
gaatgctggagtcgaactttggtttctcaaaaatggtttttgggcggctggtggtgtaga
tttggctcctgatgatttcgtcgtctggtataacaatccacgtgtgttgatggctgatat
ccattggggtcgcagtaccatcaccttctgtgtggcttatgcaccacagtcagggcaaac
agaagatctcatcaccagttggtggaatgagttgtctgtacagcttgacaaaattccgaa
agaacagccgttgtttcttcttggtgacctcaactgccatattggcagtgttggtaccga
tgcaattggtccgttggcaccagacattgaaaatggggcaggtggtaggttgcgtcagct
atgttctcagcatcagcttatcattccggccacctattcccaatggcacgatggcagctc
tcacccctatgtacatccgaagggatctcgacatcgattggactacattgtggtcagaca
gatgcagcaacatgccatttgtcgttcgtgggttgcacaggacattgaattggccaatgg
acaatgcgatcatctaccagttgctttgagtctgcaggtacagttgaagcccagtgcaca
tcatggttttcaacgccgagctgtttacaatcgcaccaaggccagggaatctctacagca
aaccacctttcctcctttgactatcactcagattccctgggaaacagacgtcaatgatca
ctggcatcttgctcgagatgagttacaagttcaagctcggaaagccttcccctttgaaaa
aagggttcaacggcaacaatattttgacaaggccacgtgggatgctatgtgtcatcgcaa
atctctacgtcaagagcatcgagcactacaacgggacattgatgggcatgttctacgcat
ggtgttcaaagcatggcgaacaggtggccccccttgtgatgaggttcaagcaggtcaatt
tcaccttcatacccagtgtttgcaggatgcgctctatgttatgcaacgcacccaatgtga
ccaacgctttcgtgcccacaagaaacaggcctggaaacaatgggctcttgatatgggtga
aaagcttcaacatgatcttcaacagggtgatgtctttcgtgtcttgaaaccaaagagagc
tttggctaaatctaagaagagggcattacccggtttgcgtgccaccaacggcacttggtg
tcagggacgaactgatatcgctgtggcttgggagaggcagtttggagaccttgagaatgc
ccaggccgttcaactgaagcaactactggacaagcaattcgaggtgcagatgctgccaaa
gccccaggccccaggagtagatggtttgggagccgagctgtttcgccaagatccagtttg
catggcccggcaactataccctatgttgctcaaagctgcctttcgacaacagtgggttgt
tgagatgtctggtggatggcttttaccattgtggaagcgaaaaggcaatccgcaacaaat
gcaatactacagaggcattttgttggaaccagttcttggtaggatcatttcccgagcgtg
gcgcaagaagatgtgccctaccatttccacttgggccgccccaatgcagtatggtggccg
tgctggactgtcaattgaagcgttgcatctacaagctcgcatgtggcaggctcatgccaa
gacacaacggcataatctggccattatttttgtggacatcaaagctgccttttacaccat
tgcgaaacctttgctgtgtaacagcaatctcaccagagctgagttggagcaatttgtgtc
tacgcttgggtttccagacacggcagcatggcgggcaaccttatcgcactcctggtttgt
tatccccaatggaacctccatcatggcaccccaaacaggcagccggccaggtgatccact
tgctgatctcctcttcagcatggttatgtcgcatgtgttgcatgaaatcaacttccggtt
gacagcagtggcacacgcggttgaaggagactcagacaaaccaattgttgaaaatgtcac
ttgggtggatgatatcgctttggccgtcacttctacagcggatggtttcattgaccgtgt
gattctggtactacaaaccgtggtggatgtgatggcagaacatggtttgacgttgtcgtt
tggtcagggcaaaacagccgtcatgttgagtttcaatggacgttgtgcagcacaagccaa
acgtcaatgtgaagagcaataccatggtgagttggttttcctcaccgagcattttggact
gactcgggttcccattgtgcaacattatcgccatcttgggggctttttggttcgacatgg
tgtggtgctgccggagatcaagattcgtgtgtcccaggctatcaccaacttgcagccagt
tcggtcggttttgagagatgagcgagtggcattggagaaacgacgtcgtctcttgcacgg
tttgggcatgtcggttgctaccctccatacaggtacttggtttcatcttgacaaagggga
acaacaagcttggcatgcagggatccagcgtatctacagccttcttgcagtgagaggaac
agacgggagtttcccacacatcaacaaatttgaggcagcgctcaaagctggttatgttga
ggcggatgaattgcttcacatacagcgattgcggcttttcattcaagttttgcggattgg
tgatgagcacatgatccaggccgtcctcaacaactatgccatcatggatgaccgcgcatg
gctttccgaggttcaacgagcctggtcatgggttattcattcgcgtggtgacgacgacct
acaagagatagagttcagtagttttctcacgctgcaggggtggaagacttatcaatccca
atggcggatgatgaaaaaatggttgaagcaggccattcgaggacattgtgtacacatgaa
gacgcatgctgctataaaggccgcagatgatgaacaacgtggcctgttgctagagcatgg
atggctccaccaggacacgtcacctcagtctgcaaatgaagacgaaccgcctgacgagca
tccgtgtcccacatgtggtttcaaggcagcgacagctgctggtttggctgtacaccaaca
tcgactacatggagcgcggatagctatgcggcgatatgcaatcgatggcatttgccgaat
atgtgcaaagaatttttgcaccagaccgaggcttctgcaacacctacatgctggtaccac
agactgttggtggaaacattgcagattataccaacctttgacggttgaagaggctcaagc
cttggacaatcaggattgcgcttccaagcaagcccaccaccaaaggggtttgcgagatga
aacacaagatagagcatgtcattcatgcaacttggatggtctgcctatgctatcttctac
gggttcgacagcttgtggacctcccagtgccgacgagttgagccactgggcttcggttgg
tcttcttcctcctggtcgtggtggacgtcagcgcacacaacgtcccagagctcaggcttc
gaagttcaacatacaggaacggtccacgcagattgaagagcaacttgtttgtgacgccaa
gaattgggatgccccagtcagcattccacgccccttggtcatggacaccaagtacattct
catcttcttttctgggcaccgtcgatggggtgatatcgcctcctgggtcagttggcttgg
catcgacaacagcattattccaatcagtgttgacattggtttgcatgctgtgtacggtga
catttacaacggacagctgtgggaaaggctgattcgagcccgcaaggtggtggcggcaca
tggtggtccaccatgtgagacctattccctggcgagatggctaccggcccctagtggtcg
acccaggccgctacggaatcgcaaattcccttgggggatcccggcacgttcactgaaaga
ggtgcagcaatgcgtggttggaactgtcctcatgttccgtacaatctacttgctcatctt
ggtgtactgctacggtggagcaatcacgatggagcacccagctgggcacaagtgcatgca
ggagcaatggtgcatttggttggcagggatgatccagcgtttgttgcgcgcaccggatgt
ggagacgattcaattcctacaaggacctcttggccaacctttcagcaagccgacaaaact
gctgattggaagacttccattactacaacgtcatttgtatgcggcttacgatgttggatg
gcggtctacggttacacttggcgggttagacagtgacggctggaagacggcggcggcgaa
gtcatacccttccaagttgtgtgaggttcttgcgaggagctacttatggtacgcagaccg
tgtgccaacatcggggcaggaagacgatcctcctcaacttgctatggcgaaggaagtgtt
gtgcaactgggatccctacaccggcagcacgatgtccttctttcgagactaccatacgag
acccgatggttagctccgcctttcgccttttgccacggtttcacctagacggcacaagcc
cgtctgttaacgtttcgccattggatgccatagtggcttttgtccggtgtttgcatgctg
gcgtctaactcagactcgatctcagtgcaagaaaaaagggtctgggga
DBGET
integrated database retrieval system
