Schistosoma mansoni: Smp_040800
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Entry
Smp_040800 CDS
T01095
Name
(RefSeq) putative glycyl-tRNA synthetase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
smm
Schistosoma mansoni
Pathway
smm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Smp_040800
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smm01007
]
Smp_040800
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smm03016
]
Smp_040800
03029 Mitochondrial biogenesis [BR:
smm03029
]
Smp_040800
Enzymes [BR:
smm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Smp_040800
Amino acid related enzymes [BR:
smm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Smp_040800
Transfer RNA biogenesis [BR:
smm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Smp_040800
Mitochondrial biogenesis [BR:
smm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Smp_040800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
8347589
NCBI-ProteinID:
XP_018651366
LinkDB
All DBs
Position
3:20532384..20564148
Genome browser
AA seq
1322 aa
AA seq
DB search
MSFALFWRVHQKSVANFPFKLALCVPKITLRLITVGVHYTQIKNMNGVTDIDSLRAKVRD
QGDIVRRLKEEKAPDNALKEAISALKAYKKALDDKEIELSPKDPAFDRGKLEDLLKQKFF
YDQSFSIYGGIQGLYDYGPMGCAMKANLLSAWRQFFILEDHLLEVDCSMLTPEPVLQASG
HVDRFTDLMVKDVKTGDCFRADHLVKSSLEAKKSNKKTPENEKQEIDKIIVQLDNYGADE
LHQIIRRFDIKSPTTMNDLTEPKEFNLMFSTMIGPTGQCKGYLRPETAQGIFVNFQRLLQ
FNQGRLPFGAAQIGSAFRNEISPRSGLIRVREFTMAEIEYFVDPSDKRHPKFEDVRNTEM
LLYSSCDQMSGERPRNVTIGEAVDRGVVANQTLGYFMARIHLFLIHIGVDAKRLRFRQHL
SNEMAHYACDCWDAECQTSYGWIECVGCADRSCYDLNQHSKATGTRLVAEKPLDEPKTVQ
VCECIPNKGELGKVFRGEAKTIIQQLSSLTLDECHCLNNQLKNTGKATLTVNGKQVDLND
SMVQIKEYKNVVHVTEIVPNVIEPSFGIGRILYTIFEHSFRVREGDEQRTYLSISPVLAP
YKCSLLPLSNHADFVPVVRKLSSELTKYSVSHRVDESSGSIGRRYARTDQIAIPYGITID
FDTLNKLPPSATLRERDSMKQIRVPLDELPSLMSDIASGNKSWDDARAKYPAFEQQETAQ
KNETAQSSSNEHSLDSITKHIGLGEISNSVKEQKNNITKTHQYTTPVHGEQTDESKETHA
SRFGKKALNWTDCGKTIRKRYKEQEEREKSLTGQDILTHTSVSNNLSRNTETGGIISGYD
ADHEDNTYGFNKLSRIHPQDSSAQLSDLPQTANCPKPLSNVPSVKKSFDSDKSHTEHDFS
SEYPPLSSNSKSREKLPYHGVFVGDGWPNGKKVDPEPKTNNSNFYVSKHNHAADKSQLSS
NLAFHNTQRYKSESTSNKNSSEWVSTLAKLDQPQFEAEMSQFFDGHSTTVRTEHMTTSKC
TSKSSQQPVVSQSNELSYHGLFVGEGWPSLKPNKKGEIIHSSGKSETRNIELEKIWQSEK
DKPNKEIAGKTNECDWSSVFSQIAESHLDSEQNQLNQIDLTDFNAFGTPKKISDTQLPPV
LQDFEPDLHAELSQNDQEKIKTIGTLEQRTNSGSGTLIKPSNKTEDRYNTNLIVEPVSKE
KILNKSIIQSDVGNDSELFVSSSPTILNHMKSDTKQTKSEVKAIDLCVHKAGESNEPVIN
EVSQNKPTPESQSSASLVNPEVLYDKNESPIVSNNPKQTDITSSKDKAKKHRNRHKKKKK
TA
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcactcttttggcgggtccatcaaaagtctgttgcaaactttccgttcaaa
ttagcactttgtgttcccaaaatcacattacgtctaataactgtcggtgtccactatact
caaataaaaaatatgaatggagttacagatattgactcattacgtgctaaggttcgcgat
cagggtgatatagtacgacgtctgaaggaagaaaaagcacctgacaacgctctaaaggaa
gctatctccgccttgaaggcttataagaaagctctagatgataaggaaattgagctgtct
cccaaggatcctgcttttgatcgtggtaaactagaggatcttttgaaacaaaagtttttc
tacgatcaatctttctctatttacggaggtattcagggtctctatgattatggccctatg
ggttgcgctatgaaagccaatttactctccgcttggcgtcaattctttatcttggaagac
catttgttggaagtagactgctctatgcttacacctgaacctgttttacaagcatctgga
catgtcgatcgattcacagatctaatggttaaagatgtgaagactggagattgtttccgt
gctgaccacttggtgaagtcatcacttgaagccaagaaaagcaataaaaaaactcctgaa
aatgaaaaacaggaaatcgataagataatcgtacagctggacaactacggggcagacgaa
ctacaccaaattatacgtcgttttgatatcaaatcaccgacaacaatgaacgacttgact
gaaccaaaagaatttaacttgatgttttcaacaatgattggtcctaccggccaatgtaaa
ggttatcttcgtccagagactgcccaaggaattttcgtcaatttccagaggctcttacaa
tttaatcaaggtcgtcttccttttggagctgctcaaattggttctgcatttcgtaatgaa
ataagcccgcgttctggcctaattcgcgtccgagagtttaccatggcagaaatcgagtat
tttgtagatcctagtgacaaacgtcatcctaagtttgaggacgtgagaaatacagaaatg
ctactttattcgtcgtgcgatcaaatgagtggcgaaagacctcggaatgttactattggt
gaagcagtcgatagaggtgttgtggcaaatcaaacgttgggatactttatggcgcgaata
cacttatttttaatccatattggtgttgatgcaaaacgactacgatttcgacagcactta
tcaaatgaaatggcccattatgcctgcgattgttgggatgctgaatgtcaaacaagttac
ggttggattgaatgtgttggttgtgcagacagaagttgttatgacttaaatcaacatagt
aaagctactggtacccgtttagtcgcggaaaaacctttagatgaacctaaaactgtacaa
gtctgtgaatgtatacccaataaaggtgagttaggaaaagtatttcgaggagaagcaaaa
accatcatacaacaattgagctcacttactctcgatgaatgtcactgtctaaacaatcag
ttgaagaacaccggaaaggctacgttaacagttaatggaaaacaagtagatcttaacgat
tcaatggttcagatcaaggaatataaaaatgttgtacatgtcactgaaatagtacctaat
gttattgaaccttcatttggcattggtcgaatattgtatactatatttgaacactctttc
cgtgtacgtgaaggtgatgagcaacgcacatatttatctatatctccagtattagcacca
tataagtgctctttactaccactttcaaatcatgctgatttcgttccagttgttcgcaag
ttatcttcagaactgactaagtattctgtttcacatcgagtcgatgaaagtagtgggtcc
atcggacgacgatatgctcgtacagatcaaattgctattccatacggaattactatcgac
tttgacaccctgaataagttacctccttcagcaacacttcgtgaacgtgacagcatgaaa
caaatcagagtaccattggatgaactgccttctttgatgtccgatatcgccagcggcaat
aagtcttgggacgatgcacgagcaaagtatccagcatttgaacaacaagaaacggctcaa
aagaatgaaacagcacaatcttcatcaaatgaacattcattagattcgataaccaaacat
atcggcttaggtgagataagcaactcagtaaaagagcaaaaaaacaatatcactaaaaca
caccaatacactactcctgtgcacggagaacaaactgatgaatctaaagaaactcatgct
agtcgatttgggaagaaagctctcaattggacagattgtggtaaaactattcggaaacgt
tataaagagcaagaggaacgagaaaaatcgctcactgggcaagacatcttgacacatact
agcgtatcaaataatctctcgcgaaacacagaaactggaggtataatctcgggttatgac
gctgatcatgaagataatacttatggcttcaataaattatctcgtattcatccccaagat
tctagcgctcagctctctgatcttcctcagacggcgaattgtccgaagcctcttagtaat
gtgccatctgttaaaaaatcatttgacagtgataaaagtcatacagaacatgacttctct
tcggaatacccaccactttcatcaaatagtaagtcgagagagaaactcccataccatggc
gtttttgttggagacggttggcccaacggcaaaaaggtagatccagagccgaaaactaat
aattctaacttctatgtctcaaaacataatcatgcagcagataaatctcagctgtcttca
aatttagcgtttcataatactcaaaggtataaaagtgaaagtacatccaacaaaaatagc
tcggaatgggtttctactttggccaagttagatcaaccacagtttgaagctgaaatgagt
cagttttttgatggacattcaacaacagtaagaacagaacacatgacaactagtaagtgc
acttcgaaaagcagtcaacaacctgttgtctctcagtctaatgaattatcttaccatgga
ctttttgtgggtgaaggatggcctagtctcaagcccaataagaaaggagagataatacat
agttctggaaaatccgaaactagaaatattgagttggaaaaaatatggcaaagtgagaag
gacaaacctaataaagagatagcaggaaaaacaaatgaatgtgattggagttcagttttc
tctcagattgcagagagccatttagattcagaacaaaatcagcttaatcagatcgatctg
actgactttaatgcttttggtactcctaaaaaaatctcagatactcaattgcctccagtt
ctccaggattttgagcctgatctgcatgctgaactgtcacaaaatgaccaagaaaaaatt
aaaaccattggaacattagaacaacgtactaattcaggatcagggacattaatcaagcca
tctaacaagacggaagatcgatataatactaacttaatagtagaacccgtttctaaggag
aagatcctaaacaaaagtatcatacaaagtgatgttgggaatgattcggagttatttgtc
agcagttcacctacaattttaaaccatatgaaatcagatacaaaacaaactaaatcagaa
gtaaaagccattgatttatgtgtgcacaaagctggcgaatcaaacgagcctgtcataaat
gaagtcagtcaaaataaaccgaccccagaatctcagtcatcagcaagtctagtaaacccc
gaagtcctctatgataaaaatgaatctcccattgttagtaataaccctaaacaaacagac
atcacttcctctaaagataaagcaaaaaagcataggaaccgacataagaaaaagaagaaa
actgcttaa
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