Schistosoma mansoni: Smp_083780
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Entry
Smp_083780 CDS
T01095
Name
(RefSeq) putative ku P80 DNA helicase
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
smm
Schistosoma mansoni
Pathway
smm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Smp_083780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smm03400
]
Smp_083780
DNA repair and recombination proteins [BR:
smm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
Smp_083780
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
VWA
Ku_C
Motif
Other DBs
NCBI-GeneID:
8346627
NCBI-ProteinID:
XP_018648725
UniProt:
A0A3Q0KIK2
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Position
1:complement(37321163..37335193)
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AA seq
833 aa
AA seq
DB search
MATALGVVLDVGIHMNPNFREAVECVRLLLEKKFFAESKDEVALILCGSDATDNALADEE
GSFQNICLAFELAPISWKVLEFLDPELLSLSTGDVVDALMVGADHLFNRCKNKKNIKEKH
LLLVSNLYGSVDDSDVSRVSESLQSSGIKFSLIGCDLKKSINVTPENRDEPGPSHAVSHH
LHHSPKTRPSISFLAELWDQLNGESYDFSDAVTALSIFETRSVLQRGWNVSLQIGDSITI
PVVGYTYIKEAHPPTMRIMYAPDPTLPLRAVTKYRTQDPDPCDLNSSEVTRGYRYGGTVV
PFGEEDMASIKPPSEKCFSVIGFTSADNIPHNFYTGESVLVFVAQSVKQSEDDVTNRPSC
PTALAALAQALYEVSGVALVRRVYNQPSAARLGVLTPEIHGDQISLMYTDIAFSEDIRDL
KLPSLPVSCEPSTSTTECFVKSSNTMKLSKNCPSQEQLSAMDSFINSMMLNYSDGSDDDD
DNDSGGVLNKRDENDVENPSSSRILKVQRISNPWIQRFFACLRKRGLDPSVPLPISKQSD
SSDVWLSPEMFPGLEEIITQINTDSETASLIESRNILLNSFPPLRPASDPVDLTEEFLAK
RRRLTDEESYTTSSFTKEVDSGYPTEQLTPISELTSTPASNSIQINSVQDFEDLICQQQT
EVACRLLEKEIIRLVTDPFTATLLRPKAIAYLFAYRRRAQPSREIVNNSNKNNHINDTTC
NSSTCHLEIARAYNSFIRSWRQDLIDRNLLGSSVLSQRASNDSKLSFWLETITQGFGLLC
NEDIPEIGVSQSENREFLNLEDIAMSHFAETKSDQPVSPDRVLKVEHLMDDTD
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgctcttggagttgtacttgatgtaggaattcatatgaatcctaatttcaga
gaagctgtcgagtgcgtaaggctgttattggaaaagaaatttttcgccgaatcaaaagat
gaagttgcacttattctttgcggctctgatgctactgacaatgctttagctgatgaagaa
ggcagttttcaaaatatatgtttggctttcgaactcgctcctataagttggaaggttttg
gaattccttgacccagaattattatcactctcgacgggagatgttgttgatgcactaatg
gtaggagccgaccacttgtttaatcgttgcaagaataaaaaaaacataaaagaaaagcac
ttgctgcttgtcagcaatttgtatggttcggttgacgattctgatgtctccagggtgtct
gaaagcctccaatcttcaggtatcaaattcagcttgattggctgtgacttgaagaagagt
attaatgtaacacctgaaaatcgagatgaacctggaccatctcatgccgtttctcatcac
ctccatcattcaccaaaaactagaccttccatttcttttttagctgaactctgggatcaa
ctaaatggagaatcatatgactttagtgatgcagtcactgcattgagtatattcgaaacc
cgtagcgttttgcaacgtggttggaatgtaagtttgcaaattggcgattctatcactatc
ccagttgtcggctatacatatataaaagaggctcatccaccaaccatgaggataatgtac
gctccagatcccactcttccactgcgcgctgttacaaaatatcgtacacaggatccagat
ccttgcgatttaaactcttctgaagttactcgaggttatcggtatggtgggactgtagtc
ccctttggtgaagaagatatggcctccataaaacccccttcagaaaagtgtttcagcgtt
attggatttacgagtgctgacaatatccctcataacttttacaccggtgaaagcgtgttg
gtttttgttgctcaatcagtcaaacaatctgaagacgatgtaaccaatcgtccatcctgt
ccaacagctctggcagcgttggctcaagcactttatgaggttagcggtgttgctcttgtc
cggagagtgtacaatcaaccaagtgctgctagactaggagttttaactccagaaattcat
ggtgatcagatatcgctcatgtatactgatatagcgtttagtgaagatattcgcgatctg
aaactcccaagtttaccagtttcctgtgagccctcgacttctactacggaatgttttgtt
aagtcttcaaacactatgaaattgagtaaaaattgtccatctcaggaacagttgtcagct
atggattcttttattaattccatgatgttaaattattcagatggaagcgatgatgatgat
gataatgatagcggtggtgtactcaacaagagagacgaaaacgacgtggaaaatccttca
tcaagcaggatcttaaaagttcaacggatatcaaacccttggattcaacgtttctttgcc
tgtcttagaaaacggggtcttgatccatcagtaccacttccgatttcaaagcaatcagat
tcttctgatgtttggctgtcacctgaaatgtttcctggtttggaggaaatcatcacacaa
atcaatacagattccgaaactgcatctctaattgaatcccgtaatattcttcttaattca
tttccacctcttcgtcctgctagtgatccagtagatttgacagaagaatttttggcgaaa
agacggcgtttaacggatgaagaatcttacactacttcttcgttcacgaaagaagtagac
agtggatatccaaccgaacaactgaccccaatttcggaattaactagcacaccggcgtca
aattccattcaaataaactcagttcaggattttgaagacctaatctgccaacaacaaact
gaagttgcttgtagacttttggagaaagaaataattcgactggtgaccgatcctttcact
gcaactttattgcgtccaaaagctatcgcttacctgttcgcttatcgtaggcgtgctcag
ccaagtagagaaatcgtcaataatagtaataaaaacaatcatattaatgatactacatgc
aacagcagcacatgtcatcttgaaattgctcgagcatataactcatttattcgtagttgg
cgccaggatcttatagatcgtaatctcctcggaagtagtgtcttatctcaacgtgcttct
aatgatagcaagttgtcgttttggctggaaacaattacacaaggtttcggtcttttgtgc
aatgaagatatcccagaaatcggagttagtcagtcagaaaatcgtgagtttttgaacttg
gaggatattgcaatgtctcattttgctgaaacaaaaagtgatcagcctgtatctcccgac
cgtgttctcaaagttgagcatttgatggatgacacagattga
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