Selaginella moellendorffii: SELMODRAFT_234158
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Entry
SELMODRAFT_234158 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12850
pre-mRNA-splicing factor 38B
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_234158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_234158
Spliceosome [BR:
smo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SELMODRAFT_234158
Complex C
U4/U6.U5 tri-SnRNP related factors
SELMODRAFT_234158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
PcrB
Motif
Other DBs
NCBI-GeneID:
9654313
NCBI-ProteinID:
XP_002983127
JGI:
234158
UniProt:
D8SIA0
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MSEFEHVLLVNVLVVDEISNRVDHLEGNFRGPSPAFCLLFKLFTMKLTDEQIQGLLNHAD
SPYVRAVRLLLFFGAFLIVANRELSGNGILSRHKWAGDKDGSVHSRSSLASVHYFDTIFP
RIPVPVARQIASHLERLKLPTTPQGTTGRHSSEETARRPPSVKAALSVSFGQRAPHRAST
RDSSPVRRSLPPSNGNNNNNNNNNNTDDRSSRGQDRTREERDRGRDREVERERPRSRDSD
YRDRGRDRRDRRDREERDKDRHSSRERENRDRDRHSSRERDRDWRRERRSRSRSRSPRRS
PRRRSSSPGMKDSDKNGSAANAAISANLLKLRDVYGDASGKKLEENQAARVKDSSGEDVI
RLGGSSWR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtttgagcacgtcctccttgttaacgttttggtcgtggatgagatttccaac
cgtgtcgatcatctggaagggaattttcgcggcccttctccagcgttttgcctccttttc
aagttattcaccatgaagctcactgacgagcagatccaggggcttctcaaccacgctgat
tctccttacgttcgtgcggtacgattgcttcttttctttggagcttttctcattgtggcg
aaccgagaactctctggcaatggaattctctcccggcacaaatgggcgggtgacaaagat
gggagtgttcactcgcgatcttctcttgcatcagtgcattatttcgacaccatctttcca
aggataccagttccagtggcgagacagatcgccagccacctggagcggctaaagctcccc
acgactccccaaggaacaaccggccggcactcgtcggaggagaccgcccgccggccaccc
tcagtgaaagccgcactttcagtctccttcggccagcgagcacctcaccgagcttcgact
agagactcgtctcctgtccgaagaagcctccctccatcaaatggcaacaacaacaacaac
aacaacaacaacaacactgacgatcgtagcagcagaggccaggacaggactcgcgaagag
agagaccgaggccgagaccgtgaagtggagagggagaggccgagaagcagggactcggac
tacagggatagaggacgggacaggagggaccggcgggacagagaggagagggataaagac
cggcactcttctagggagagggagaaccgggatagagaccgacactcttccagggagagg
gatagagattggagaagggagaggcggagtagaagccggagccggagcccgagaaggagt
ccgaggaggaggagctcgagccccggaatgaaagacagtgacaagaatggcagtgccgca
aacgctgcgatatcggcgaacttactcaagctccgggacgtgtatggcgatgctagcggc
aagaagctcgaagagaaccaagcagcgcgagtgaaagactcgagcggcgaggacgtgatt
cgtctgggtggatcgagctggaggtag
DBGET
integrated database retrieval system