Selaginella moellendorffii: SELMODRAFT_441420 Help Entry SELMODRAFT_441420 CDS       T01496                                  Name (RefSeq) hypothetical protein   KO K12599   antiviral helicase SKI2 [EC:3.6.4.13] Organism smo  Selaginella moellendorffii Pathway smo03018   RNA degradation Brite KEGG Orthology (KO) [BR:smo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     SELMODRAFT_441420  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:smo03019]     SELMODRAFT_441420 Messenger RNA biogenesis [BR:smo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      SELMODRAFT_441420   mRNA degradation factors    3'-5' decay     Ski complex      SELMODRAFT_441420 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD MTR4_beta-barrel Ski2_N MTR4-like_stalk Helicase_C ResIII ATPase_2 Motif Other DBs NCBI-GeneID:  9642533 NCBI-ProteinID:  XP_002971102 JGI:  441420 UniProt:  D8RJE3 LinkDB All DBs Position Unknown AA seq 1311 aa AA seqDB search MAPPKLGGELPFKIGVAGYSGELQVEILPSISRSNPLDDLPELILPPVQPPQTSAGILAE IEEKYLVPRLDREIDDVKRTGKNWEVDWFGDGFYLYEPSLAPLTISPVWKPPFRRKESEY RTSEEQGRVWVPEFEQIKPEYGSDAASSMLRKPGNPADFVRGSSSNQPFRPGGVDLGEKI IPEGAQNGEWLAEVLEGKPLQTVAPGFKRGLSNLGVPEPFTWSKKSDVSSAETFKEPEKK DSVLHYEDLFRKAWEHQMLEDDSEVDDEDPIDEVVLKDEVEPESEVDKILATETVEAAPV PKAEAKQEWVVMDGDSGVAERFLELIPDMAIQFPFELDKFQKEAIYHLEKNESVFVAAHT SAGKTVVAEYAFALSAKHCTRAVYTSPIKTISNQKYRDFSEKFDVGLLTGDVSIRPEASC LIMTTEILRSMLYKGADLVRDIEWVVFDEVHYVNDAERGVVWEEVIIMLPQHVNLVLLSA TVPNIREFADWVGRTKQKKIYVTGTTKRPVPLEHCLFYSGELHRICANETFLPLGVKAAK DAHLAKTAVKKGPVAPTQGGRGNVQGRGGPGGRGGRGNKVIPEEKNSRGGPWRSETSQWY GLINVLSKKNLLPVVVFCFSKSRCDQSADSLTGSDLTTSTEKGVIRVFCNKAFSRLKGTD RQLPQVLRIEELLKRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPART VAFHGFRKHDGKSFRQLYPGEYTQMAGRAGRRGLDTVGTVIVMCWDDIPDEGDLRRLLTG KATKLESQFRLTYTMILNLLRVEELKVEDMLKRSFAEFHAQRALPEQQQQLLRQEGELSK MAATIECILGDPTIEDYYKLASEADMLGESIQEKVMNSRAAQQALIPGRIVTVKTTIYPV PALGVVLRGPSGTTKMSIVLTLYRGAVPASAKLQPPTKKLDQDGGYFISKKNKNDDDEFA VFSGSKKSSGVIRLTMPHYGTVGGVSFLVAETSGQEFLSISKEKIRVDANRILEEESTMA ISAVLQALTELERLYPADPPPLDPVKDLKLNDIDAVEKYKKKQAITELMAQNKCHRCPKL QEHYSIIKNRQLLRDRVDKLKFDVSDNALQQMPEFQRRMDVLQDVGCIDSELIVQLKGRV TCEFNTGDELIAAECLFDNQLADLNAAESIALLSSLVFQQRETSEPVLTEKLAAAKTRLY NTALQLGDLQVSHGLVSHAEDYARDALHFGLMEVVYEWAKGTPFSTICEMTDVSEGLVVR TIVRLDETCREIKNAARIMGDTTLFNKMDEASNLIKRDIVFAASLYVTGLV NT seq 3936 nt NT seq  +upstreamnt  +downstreamnt atggcgcctcccaagctaggaggcgagcttccattcaagatcggcgtcgcgggatacagc ggtgagctccaggtcgaaatattgccttcgatttcgcggagcaatcccttagacgatctt cctgagctgattttgccaccagtgcagcctccccagacctccgcggggattcttgcagag atcgaggagaaatatctagttcctcggctggacagggagattgatgacgtgaaacggaca ggaaaaaactgggaggtcgactggtttggagatggattttatctctatgagccgtctctg gcaccgcttacgatttctccggtgtggaagccgccgtttagacgaaaggagagtgagtat cgtacgtcggaagagcaagggagagtttgggttcctgagtttgagcagatcaagcctgag tatggaagcgacgctgcttcatcgatgttgcggaagccaggaaatccggccgactttgtc cgtggaagttcgagcaatcaaccgtttcgaccaggtggagttgatcttggcgaaaaaatt attcccgaaggcgcacagaacggagaatggctagccgaagttttagaaggcaaaccactg cagactgttgctccgggttttaaacggggtttatccaatcttggtgtccctgagccattt acatggtccaagaagtcggatgtgtcttctgcagagacattcaaggaaccagaaaagaag gacagtgtcctacattacgaagacttatttcggaaggcatgggaacatcaaatgctggaa gatgatagtgaggtcgatgacgaagatcccatcgacgaggttgtattaaaggacgaagtg gaacccgagtctgaagttgataaaatccttgcaactgaaacggtcgaggctgctcctgtg ccgaaggcagaggctaaacaggaatgggtggttatggacggagatagtggtgtagcagaa aggtttttggagcttataccagatatggcaatccaatttccttttgaacttgacaagttt caaaaagaggcaatctatcaccttgagaaaaatgaatccgtgtttgttgctgcacacaca tcagcgggcaagacagttgttgctgaatatgcatttgcattatctgcaaagcattgtaca agggcagtgtatacgtcccccatcaaaaccatcagcaatcagaagtatcgtgattttagt gagaagtttgatgtcggacttctgactggggacgtgagtatacgacccgaggcttcctgc ctgattatgaccacagagattctccgctctatgctttacaagggagcggaccttgtacgg gatatagaatgggtagtttttgatgaagtccattacgtaaatgatgctgagcgaggtgtt gtatgggaagaagtcattatcatgcttccccagcatgtcaatcttgttttactatcagct acggtgcctaacattagggagtttgctgattgggttggtcgcacaaagcaaaagaagata tacgtaactgggacgactaaacgaccagttcctttggagcactgtctgttttattcggga gagcttcatagaatatgtgcaaacgagactttcttacctctcggtgtcaaggctgccaag gatgcacatttagcgaaaacagcagtgaaaaaaggtcctgtggcacctacacaaggagga cggggaaatgttcaggggagaggcggacctggtggcagagggggcagagggaacaaagtc attccagaggagaaaaacagtcgtggcggtccatggcgttctgagacttcccagtggtat ggactcatcaacgtactatcaaaaaagaacttgttgcctgtggtggtgttctgtttttca aaatctcgctgcgatcaatcagcagacagcttaaccggatcagatttgacaacatcaaca gaaaaaggagtgattcgcgttttctgtaacaaggccttttcacgcctcaagggcacggat aggcaacttcctcaggtccttcggattgaagaattgctgaagcgaggtatcggagttcac cacgctggtttacttcctattgtgaaagaggtagtggagatgctcttttgccgaggcgta atcaaggtcttgttctctactgagacattcgcaatgggagtcaatgcacctgccagaacg gttgcatttcatggattcaggaagcatgatggtaaatcatttaggcagctttatccaggc gagtacactcagatggcgggccgagccgggcgaagaggccttgacacggtaggaactgta atagttatgtgttgggatgacatacccgacgaaggagatttaagacgtctcttgactggg aaggccacgaaactggaatcacagtttagattaacttacacgatgattctgaaccttctt cgagtagaggagttgaaggtcgaagacatgctcaaacgcagttttgcggaatttcatgcc caacgtgcacttcctgagcaacagcagcaacttcttagacaagagggcgagctttcaaaa atggctgcaacgatagaatgtattcttggcgaccccacgattgaagattattacaaatta gcaagcgaggcagatatgctcggagagagcattcaggaaaaagtgatgaactcccgtgca gcacagcaagctcttataccgggacgaatagtcactgtcaagacgactatctacccagtt ccagctttgggtgttgtcctaagaggacctagcgggacaacaaaaatgagcatcgttttg acactttaccgtggtgcagttccagcctcagcaaaacttcagcctccaactaaaaagctt gatcaagatggaggatatttcatcagcaagaagaacaagaacgacgacgacgagttcgca gttttttcggggtccaagaaatcttcaggtgtcattcggttgacgatgccgcactacgga acggtgggaggagtctcctttctggtcgcagagaccagtggccaggagtttctcagcatc tcgaaggagaaaatccgggttgatgccaatcggatcttagaagaagaaagcactatggcc atctcggctgtactgcaagccctcacagaacttgagagactttatccggcagatcctcca cctcttgatcccgtaaaagatttgaagctcaacgatatcgatgccgtcgaaaagtacaag aagaagcaagccatcacggagcttatggcacaaaacaagtgccatcggtgtccaaagctg caagagcactactcgattatcaagaaccgacagctgctgagagatcgcgtggacaagctt aaattcgatgtttcagacaacgcattacaacaaatgccagagtttcagcgtcgtatggat gttctccaggacgttggctgcatcgattcggagctcatcgttcagctcaaaggccgtgtg acgtgcgagttcaacactggcgatgagctgatcgcggcggagtgcctctttgacaaccag cttgcggatcttaacgctgctgaatcgatcgccttgttgtcctcgctggtgttccagcag cgtgaaactagcgagcctgtcctcactgaaaagctcgcggctgcgaaaacaaggctttac aacacagcgttgcagcttggagatttgcaagtgagccatgggcttgtttcacacgccgaa gactacgctcgtgacgccctccattttggactcatggaagtggtgtatgaatgggcaaag ggaactccattctcaacaatttgtgagatgaccgacgtttccgaaggtctggtggtgaga actatagtccgattggacgagacatgtagagagattaagaacgcggcgcggattatggga gacacgacgctcttcaacaaaatggatgaagcttccaaccttattaaaagagatatcgtc tttgctgcaagcttgtatgttacagggcttgtataa

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