KEGG   Sordaria macrospora: SMAC_06280
Entry
SMAC_06280        CDS       T01610                                 
Name
(RefSeq) uncharacterized protein
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
smp  Sordaria macrospora
Pathway
smp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SMAC_06280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smp03019]
    SMAC_06280
Messenger RNA biogenesis [BR:smp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SMAC_06280
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     SMAC_06280
SSDB
Motif
Pfam: Not3 NOT2_3_5_C EAD9 WKF DUF1192 Transcrip_reg TEDC1 Cep57_MT_bd Med10
Other DBs
NCBI-GeneID: 10803284
NCBI-ProteinID: XP_003345879
UniProt: F7W6C3
LinkDB
Position
Unknown
AA seq 662 aa
MAARKLAQEVDKCFKKVAEGVAEFEAIYEKIEQSNNPAQKDKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLLEHRRLIETQMEKFKAVEKAMKTKAYSKEGLSAAAKLDPKEQAK
LEAGEFLSQMVDELEQQIETLEAESESIQATMKRGKGQGAKADRISEIERIIERHKWHQG
KLELIRRSLENGGVETEQVNDLEESIRYYVTDGMNEDFMDDEGIYDELNLEEEEDAYGMN
VDNDKGSSQDAQSVQDEPEPEPKPASVPAAKQRTPAETVAASSTRRSSAQLKSPLPTLAT
VHTNTLTSISNTPASNAPMKPASLPTRPAEGLKYASAAAAAAASDKSGVGIAPLPPPPTA
NSSLPASHVKTSAANSPSVATVQPVSQERIANAVPPAAVASVSNTPATSKAEPAKNVTSR
NKAPAPAPAPAPAPAAVATTSKATPEPEPVETQPKGRNSPHPCQTSPTNVCTVPQTNGTS
NGIKPIEEAEEDESIYHLPASLQDLVESYEVTKKCPAPLGSPATQRMHTAALANKPNSLD
TELPRPYYPDVRYHTHNQFPQEPLAIFEDPRLYQRIDPDTLFYVFYYKQGTYQQYLAAKA
LKDQSWRFHKQYQTWFQRHEEPKSITEEFEQGTYRFFDYESTWMNRRKADFKFTYKFLED
EV
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcggcccgaaagcttgcgcaagaagtcgacaagtgcttcaagaaggtcgcagaaggc
gtggcggagttcgaggccatttacgagaagattgagcagtccaacaaccccgcccaaaag
gacaagctcgaggataacctcaaacgagaaataaaaaagctccaaaggctcagagaccag
atcaagacatgggcggctagtaacgacatcaaggacaaggctcctttactcgagcatagg
cgcttgatagagacgcaaatggaaaagttcaaggccgtagaaaaggccatgaagaccaag
gcgtattccaaggagggcctgtcggctgcggccaagctggaccccaaagagcaagccaag
ttggaggcgggcgaattcctcagccaaatggtcgacgagctggaacaacagatcgagacc
ctcgaggccgagagcgaatcaatacaggccaccatgaagaggggcaagggacaaggcgcc
aaggccgaccggataagcgaaatcgagcgcatcatcgaacgacacaaatggcaccagggg
aagctggagctgattcgacgatctttggagaacggcggcgtcgagaccgagcaagtgaac
gacctggaagaaagtatccgatactacgttaccgatggcatgaacgaggatttcatggac
gacgagggcatttacgatgagctgaatttggaggaagaagaggatgcctacgggatgaat
gtcgacaacgacaagggatcctcacaggatgcccagtcggtccaggacgagcccgaaccc
gagcccaagccggcgagcgtgccggcggcgaaacagcgtaccccagccgaaaccgttgca
gcatcatcaacacgacgctcttctgcgcagttgaagtcgccactaccgacattggcgaca
gtccacaccaacacgctgacaagcattagcaatacaccggcaagcaacgcacctatgaag
ccggcatcactacccacgaggccggccgagggtctcaagtatgccagtgcggcagccgcg
gcagccgcgagcgacaagagtggtgtaggaatcgcgcctctacccccgccgccaacggcc
aactcgtcgctaccagcatcccacgtgaagaccagcgcagcaaactcacccagcgtggca
acggtgcagccggtttcccaggagaggatagcaaacgcagtacccccagctgctgttgcg
tcggtttcgaataccccggcaacgagcaaagcagaaccggccaagaacgtgacttcgcgt
aacaaggcaccggcaccggcaccagcaccagcaccagcaccagctgctgtagcaacaact
tccaaagcaacacccgaaccagaacccgtggaaactcagccgaaaggtcggaacagtccg
catccatgccagacctcgcctactaacgtgtgtacagtgccccaaacgaacggtacgagc
aatggcatcaagcccatcgaggaagcggaagaagatgagtcgatttaccatctaccagcg
tctttgcaggatctggtcgagtcatacgaggttaccaagaagtgcccagcgcctttgggt
tcgcctgccacgcagaggatgcacacggcggcattagcgaacaagccgaattccctcgac
actgagctaccgcgaccttactaccccgatgtcaggtaccacacgcacaaccagttcccg
caggagcccctggccatctttgaggatcctcgactctaccagcggattgatccggacacc
ctcttttacgtcttctactacaaacagggaacatatcaacaataccttgctgccaaggcc
ctgaaagatcaaagttggaggtttcacaagcagtaccagacgtggttccagcgacacgag
gagccgaaatcgatcacggaggaattcgaacaaggaacctatcgtttctttgactacgag
agcacatggatgaatcgcaggaaggccgacttcaagttcacttacaagttccttgaggac
gaagtataa

DBGET integrated database retrieval system