Sulfurospirillum multivorans: SMUL_2581
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Entry
SMUL_2581 CDS
T03049
Symbol
rhlE3
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
smul
Sulfurospirillum multivorans
Pathway
smul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SMUL_2581 (rhlE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smul03019
]
SMUL_2581 (rhlE3)
Enzymes [BR:
smul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SMUL_2581 (rhlE3)
Messenger RNA biogenesis [BR:
smul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMUL_2581 (rhlE3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
CMS1
UTP25
P-loop_SecA
AAA_22
ssDNA-exonuc_C
UvrD_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AHJ13822
UniProt:
A0AA86AQA9
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All DBs
Position
2490608..2491855
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AA seq
415 aa
AA seq
DB search
MLFSDLKLSPALLKAIHDEGYTTPTPVQEKAIPSILEGRDMLAGAQTGTGKTAGFTLPIL
ELLSQKPHAKGKPLLRVLILTPTRELAAQVQESVKAYGKYLPYKSAVIFGGVSINPQIQM
LRAGIDILVATPGRLLDHVSQGTIDLKHIETLVLDEADRMLDMGFIKDIRRVISLLPTKR
QNLLFSATYSDDIKKLCESILRNPVIVEVARRNTSSELVNQRVIMVDCKRKTALLAKLIQ
ENKWEQILVFTRTKHHANKVSEYLAKINISSAAIHGNKSQGARTKALADFKNGSVKVLVA
TDIAARGLDIDQLPHVVNLELPNIAEDYVHRIGRTGRAGNNGEAISLVCVDEHEYLAGIE
KLINRKFKREIIEGFEPNPDIKAEPIQQGRGSKPQGQPRRRDNAPREYVEKRRNR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcagatttaaaactcagccctgcgcttttaaaagcgattcacgatgaaggc
tatacgaccccaacacccgtacaagaaaaagcgattccttccattttagaaggtcgcgac
atgcttgcaggtgcgcaaacgggaaccggaaaaaccgcaggctttacgcttcctatttta
gagcttctctcccaaaaacctcacgctaaaggcaaaccgcttcttcgcgtgctcattctc
accccaacacgtgaacttgccgcacaagtgcaagagagcgttaaagcgtatggcaaatac
cttccgtataaaagtgcggttatctttggaggggtgagtatcaaccctcagattcagatg
ttacgtgctggcatcgacattttggtcgcaacaccaggtcgtttgttagaccacgtctca
caaggtacgattgatctcaaacacatcgaaactttagtcctcgatgaagccgatcgtatg
ctcgatatgggctttatcaaagacattcgtcgtgtcatttcgttacttccaaccaagcgt
caaaacctacttttctcagcgacctattcggatgatatcaaaaaactctgtgaatcgatc
ttgagaaatcccgtcattgtcgaagtggcacgtcgcaatacatcgagtgaactggtcaat
caacgcgtcattatggtcgattgcaagcgcaaaactgccctacttgccaagctgattcaa
gagaacaaatgggagcaaattttggtttttacgagaaccaaacaccatgcaaacaaagtc
tctgaataccttgccaagatcaatatcagctctgcggcgattcatggcaataaaagccaa
ggtgcccgaaccaaagcgctcgctgattttaaaaacggctcggtcaaagtgctggtggca
accgacatcgcagcacgcggtctggatatcgaccaactcccacacgtggtcaatcttgag
cttcccaatattgcagaggattatgttcaccgtatcggacgaacagggcgtgctggcaac
aacggcgaggcgatttcactcgtgtgtgtcgatgagcatgagtaccttgcaggcattgaa
aaactgatcaaccgcaagtttaaacgtgaaatcatcgaagggtttgagcccaatcctgac
attaaagcagagcccattcaacaaggtcgtggcagtaaaccccaaggtcaaccgcgtcgc
agagacaatgcgcctcgtgaatacgtcgaaaaaagaagaaacaggtaa
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