Ancylobacter novellus: Snov_2435
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Entry
Snov_2435 CDS
T01258
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
sno
Ancylobacter novellus
Pathway
sno03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Snov_2435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sno03400
]
Snov_2435
DNA repair and recombination proteins [BR:
sno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Snov_2435
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Snov_2435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
AAA_22
SWI2_SNF2
Kinesin
MutS_II
DUF87
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
ADH89730
UniProt:
D7A3H1
LinkDB
All DBs
Position
complement(2555503..2558064)
Genome browser
AA seq
853 aa
AA seq
DB search
MAKASRPGGFGERSQRAFEPAQVSTLDPALAEKLGVAPTSGASATVAALSALIEGGRAEV
DRQVWTPHRPARPEKSEGGVKFVLKSDYTPNGDQPKAIDDLVAAASEGERDQVLLGVTGS
GKTFTMANVIQRLQRPALVLAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVP
RTDTFIEKESSINEQIDRMRHSATRSLLERDDVIIVASVSCIYGIGSVETYASMTFKIEV
GERIDQRALLADLVALQYKRTQGDFGRGTFRVRGDVIEIFPAHYEDRAWRVSLFGDEVES
IQEFDPLTGQKSQDLKFVKLYANSHYVTPRPTLIQAIAGIKNELRHRLDELNAMGRLLEA
QRLEQRCTFDLEMMEATGSCAGIENYSRWLTGRLPGEPPPTLFEYVPDNALIFVDESHVT
VPQIGAMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWEAMRPQTVHVSATPGKWEMER
TGGVFVEQVIRPTGLVDPEVEVRPARTQVDDLLGEVRQTAAKGYRTLVTTLTKRMAEDLT
EYLHENGIRVRYMHSDIDTIERIEIIRDLRLGAFDVLIGINLLREGLDIPECGLVAILDA
DKEGFLRSETSLVQTIGRAARNVDGRVVLYADSITGSMERAMAETERRRAKQIAWNTEHG
ITPESVRKAIGDILNSVYERDHVTVDAGLAEEGATYGHNLAAVIADLEKRMRTAAADLDF
EQAARLRDEIKRLQATELVLSDDPLARQENVDDRTGGYRGERKYGRSANLPEKKGGGRRS
SPGHVSSGHEARADEAQARYDAGGASRIVRPSLDDMGPGTDRTEPLRVEDWVRPERPDPM
TKGYRKGGRRKGR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcttcacgtcccggcggattcggagagcgctcccagcgcgccttcgagccc
gcgcaagtttccacgctcgatcccgcccttgccgagaagctcggcgtggcgccgacctcg
ggtgcctccgccaccgtcgccgcgctctccgcgctgatcgagggcggccgcgccgaggtc
gaccggcaggtctggacgccgcaccgtccggcgcgcccggagaagtccgaaggcggcgtc
aagttcgtgctgaagtcggactacacgcccaatggcgaccagccgaaggcgatcgacgac
ctcgtggcggcggcgagcgagggcgagcgcgaccaggtgctgctcggcgtcaccggctcg
ggcaagaccttcaccatggccaacgtcatccagcgcctgcagcgcccggcgctggtgctg
gcgccgaacaagacgctggcggcgcagctctatggcgagttcaagagcttcttccccgac
aatgcggtggagtatttcgtctcctattacgactactaccagccggaagcctacgtcccg
cgcaccgacaccttcatcgagaaggaatcctcgatcaacgagcagatcgaccgcatgcgc
cactcggcgacgcgctcgctgctggagcgcgacgacgtcatcatcgtcgcctcggtgtcc
tgcatctacggtatcggctcggtcgagacctatgcctcgatgaccttcaagatcgaggtg
ggcgagcgcatcgaccagcgcgcgctgctcgcggacctcgtggcgctgcaatacaagcgc
acgcagggcgatttcggccgcggcacgttccgggtgaggggcgacgtcatcgagatcttc
ccggcgcattacgaggatcgcgcctggcgcgtctcgctgttcggcgacgaggtggagagc
atccaggaattcgacccgctcaccgggcagaagtcgcaggacctcaaattcgtcaagctc
tacgccaactcgcattatgtgacgccgcgcccgacgctgatccaggccatcgccggcatc
aagaacgaattgcgccaccggctcgacgagctgaacgccatgggccgcctgctggaagcc
cagcggctggagcagcgctgcaccttcgacctggagatgatggaggcgacgggaagctgc
gcgggcatcgagaactattcgcgctggctcaccggccgcctgccgggcgagccgccgccg
accctgttcgagtacgtgccggacaacgcgctgatcttcgtcgacgagagccatgtgacg
gtgccgcagatcggcgccatgtatcgcggcgacttccgccgcaaggcgacgctggcggaa
tacggcttccgcctgccgagctgcatggacaaccggccgctgcgcttcgaggaatgggag
gcgatgcgcccgcagacggtgcatgtctccgccacccccggcaaatgggagatggagcgc
accggcggcgtcttcgtcgagcaggtgatccgcccgaccggcctcgtcgacccggaggtc
gaggtgcgcccggcgcgcacgcaggtggacgatctcttgggcgaggtgcggcagacggcg
gcgaagggctaccgcacgctggtgacgacgctcaccaagcgcatggccgaggatctgaca
gagtacctgcacgagaacggcatccgcgtgcgctacatgcattcggacatcgacacgatc
gagcgcatcgagatcatccgcgacctgcggctcggcgccttcgacgtgctgataggcatc
aacctgctgcgcgagggcctcgacatcccggaatgcgggctggtcgccatcctcgacgcc
gacaaggaaggcttcctgcgctcggagacctcgctggtgcagaccatcggccgcgccgcg
cgcaacgtcgacgggcgggtggtgctctatgccgacagcatcaccggctcgatggagcgg
gcgatggccgagaccgagcgccgccgcgccaagcagatcgcctggaacaccgagcacggc
atcaccccggagagcgtgcgcaaggcgatcggcgacatcctgaacagcgtctatgagcgc
gaccatgtgacggtcgatgccggcctcgccgaggagggcgccacctatggccacaacctc
gcggcggtgatcgccgacctcgagaagcgcatgcgcacggcggctgccgatctcgacttc
gagcaggcggcgcggctgcgcgacgagatcaagcggctgcaggcgaccgagctcgtgctc
tccgacgacccgctggcgcggcaggagaatgtcgacgaccgcaccggcggctatcgcggc
gagcggaagtatggccgctcggccaatttgccggagaagaaaggcggcgggcggcggtcg
tccccgggccacgtttcctccggccatgaggcgcgggccgacgaggcgcaggcgcgctat
gacgcgggcggcgcctcgcggatcgtcaggccctcgctcgacgacatgggccccggcacc
gaccgcaccgagccgctgcgcgtcgaggactgggtgcgcccggagcgtccggacccgatg
accaagggctaccgcaagggcgggcggcgcaaggggcggtaa
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