Streptococcus pneumoniae SPNA45 (serotype 3): SPNA45_01268
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Entry
SPNA45_01268 CDS
T02245
Name
(GenBank) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
snu
Streptococcus pneumoniae SPNA45 (serotype 3)
Pathway
snu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPNA45_01268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snu03400
]
SPNA45_01268
Enzymes [BR:
snu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SPNA45_01268
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPNA45_01268
DNA repair and recombination proteins [BR:
snu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPNA45_01268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
OrfB_Zn_ribbon
Zn-ribbon_8
zinc-ribbons_6
RNHCP
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CCM08553
LinkDB
All DBs
Position
1276771..1277595
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL
LFCLTDKVLISHLRMEGKYFYYPDQVPERKHAHVFFRFEDGGTLVYEDVRKFGTMELLVP
DLLDAYFISKKLGPEPSEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGLGNIYVDEVLW
RAQVHPARPSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTYTNAFGEDGSMQDFHQVY
DKTGQECVRCGTIIEKIQLGGRGTHFCPNCQRRD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggttgaaaccgtttgtcgtggcttagaaaaattgattatagga
aagaagatttcgagtatagaaattcgctaccccaagatgattaagacggatttggaagag
tttcaaagggaattgcctagtcagattatcgagtcaatgggacgtcgtggaaaatatttg
cttttctgcctgacagacaaggtcttgatttcccatttgcggatggagggcaagtatttt
tattatccagaccaagtgcctgaacgcaagcatgcccatgttttcttccggtttgaagat
gggggcacgcttgtttatgaggatgtacgcaagtttggaaccatggaactcttggtgcct
gaccttttagacgcctactttatttctaaaaaattaggtcctgaaccaagcgaacaagac
tttgatttacaggtctttcaagctgcccttgccaagtccaaaaagcctatcaaatcccat
ctcctagaccagaccttggtagctggacttggcaatatctatgtggatgaggttctctgg
cgagctcaggttcatccagctagaccttcccagactttgacagcagaagaagcgactgcc
attcatgaccagaccattgctgttttgggccaggctgttgaaaaaggtggctccaccatt
cggacttataccaatgcctttggggaagatggaagcatgcaggactttcatcaggtctat
gataagactggtcaagaatgtgtacgctgtggtaccatcattgagaaaattcaactaggc
ggacgtggaacccacttttgtccaaactgtcaaaggagggactga
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integrated database retrieval system
