KEGG   Streptomyces niveus: BBN63_10170Help
Entry
BBN63_10170       CDS       T04887                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
snw  Streptomyces niveus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:snw00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BBN63_10170
Enzymes [BR:snw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BBN63_10170
DNA repair and recombination proteins [BR:snw03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BBN63_10170
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2436946..2437830
Genome map
AA seq 294 aa AA seqDB search
MTPIAEVEGRRIALSNLEKVLYPATGTTKGEVLHYCATSAGALLSHLANRPVSFLRYPDG
PAGQLFFTKNPPPGTPSWVRRATVPRSAEQSAEQVLVEDLATLMWAANLVVEFHTPQWQV
DSPARADRIVFDLDPGEPATVVECCAAALWLRERLTVDGLNAYAKTSGSKGLHLLVPLEP
TPSREVSAYAKSLAVEAEAELPHLVVHRMARALRPGKVFVDHSQNSAAKTTAAPYTLRAR
TEPTVSAPVSWEEVGDCAAPEDLVFRIGDIAGRLARYGDLLGPLINLNRAGRLP
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atgacgcccatcgccgaggtggaggggcggcggatcgccctcagcaatctggagaaggtc
ctctacccggccaccggcaccaccaagggtgaggtcctgcactactgcgcgacctcggcc
ggcgccctgctcagccatctggccaatcgccccgtctccttcctccgctacccggacggc
cccgccggccagctcttcttcaccaagaatccgccgccgggcaccccgtcctgggtgcgc
agggccacggtgccccgttcggcggagcagagcgccgagcaggtgctggtggaggacctg
gcgacgctgatgtgggcggcgaacctggtcgtggagttccacactccgcagtggcaggtc
gacagccccgcccgcgccgaccgcatcgtcttcgacctggaccccggcgagcccgccacc
gtggtcgagtgctgcgcggcggcgctctggctgcgggagcggctgacggtggacgggctg
aacgcgtacgccaagacctcgggctcgaagggcctgcatctgctcgtaccgctggagccg
accccgtcgcgcgaggtctccgcgtacgccaagtcgctcgccgtcgaggcggaggccgag
ctgccgcatctggtggtccaccggatggcccgcgcgctccgtcccggcaaggtcttcgtc
gaccacagccagaattcggcggcgaagacgacggcggcgccgtacacactgcgcgccagg
acggaaccgaccgtctccgccccggtgtcctgggaagaggtcggcgattgcgcggcgccg
gaggacctggtcttccgcatcggcgacatcgcggggcgattggcacggtacggggatctc
ctcggcccgctcatcaatctcaaccgggcgggccgcctgccgtga

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