Sodalis praecaptivus: Sant_0860
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Entry
Sant_0860 CDS
T03004
Symbol
recC
Name
(GenBank) Exonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sod
Sodalis praecaptivus
Pathway
sod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sant_0860 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sod03400
]
Sant_0860 (recC)
Enzymes [BR:
sod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sant_0860 (recC)
DNA repair and recombination proteins [BR:
sod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sant_0860 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHF75943
UniProt:
W0HUY8
LinkDB
All DBs
Position
948963..952367
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AA seq
1134 aa
AA seq
DB search
MFTVYHSNQLDLLKTLTAALIAGRPLRDPFQPEVILVQSNGMAQWMQMELAAHFGIAANI
DFPLPASFIWQMFTRVLPDIPDESAFAKSAMTWRLMTLLPRLCQQADFAAISEYLRDDDD
KRKVFQFAARVADLFDQYLVYRPDWLESWQRGETIDDLGEAQRWQAPLWRALMAETERAG
QPLWHRANLYQRFIQTLTQSQTRPPGLPDRVFICGISALPPTYLQALQALGRHIDIHLLF
TNPCRYYWGDIRDRAFLARLLHRRRRHYQQQTEQALFRRPEQAAALFDALGEQQTGNPLL
ASWGKQGRDNLYLLAQMDGIAEVNAFVEPAGDNLLSLVQRDILALEDHAVIGMDGETLTQ
GGGKRPLRLDDRSLSLHVCHSPQREVEVLHDSLLAMIAEDPTLRPRDVIVMVADIDRYTP
AIQAVFGSAGGERYLPFAISDRRARHLHPVLPAFLSLLELPRSRFAAEQVLALLEVPALA
ARFAIDEQGLQLLRLWVAESGIRWGLDDDTLRELMLPATGQHTWQFGLTRMLLGYAMDSE
SGDWQGILPYDESSGLIAGLVGQLAELLMRLRHWRDRLAQPRALDAWLGCAREMIEDFFA
PDAEAEAALALLENQWQQVLQCGLQVGYDQPVPVTLLQDELAARLDQERVSQRFLAGTIN
FCTLMPMRSIPFRVVCLLGMNDGVYPRTLPPAGFDLMAQQPQRGDRSRRDDDRYLFLEAL
LSAQQRLYISFIGRAIQDNTPRYPSVLVSELSDYIAQSFHLPGDEHADAESSADRVRAHL
WQWHSRMPFAPENFLPGSESQSFADEWLPAAGAEGEPQPDFVAPLTAPPCEALALDELLR
FYRHPVRAWFVQRLAVSFHQTSLELAADEPFVIDGLTRYQLNDRLVNALIDGDSTDRLFR
QVRAAGLLPYGAFGELYWAKQCQEMTALSEQVRTWRLPETHSVEVFLTLDAVTLSGWLPR
VQANGLLRWRPGTLSARDGLLLWVEHLAYCAMGGEGESRMFGTRGEWHFAPLPACRAKAF
LLSLVSGYCQGMASPLLLLPRAGGAWLSQCYDPVTQSIDRDESRQRQARDKLIQAWQGNG
HVPGEGEDPYLQRLMRQLEEQHIEAIISAAERYLLPPFMFNLAQSEPAKREKKA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgtttatcattccaaccagctggatctgcttaagacccttaccgccgcgctg
attgcgggcaggccgctgcgcgatcccttccagccggaagtgattctggtgcaaagcaac
ggtatggcgcagtggatgcagatggagttggcggcacacttcggcattgcggccaacatt
gactttcctctgccggccagctttatctggcagatgttcacccgcgtcctgcccgatatt
cctgacgaaagcgcatttgccaaatcggcgatgacctggcggctgatgacgctgctgccg
cgtctgtgccagcaggcggattttgcggcgataagcgagtatctgcgcgatgacgatgat
aagcgtaaagtgttccagtttgctgcccgggtggcggatctcttcgaccaatatttggta
tatcgtcccgactggctggaaagctggcagcggggtgaaacgatcgacgatttaggcgag
gcccagcgctggcaggcccccttgtggcgggcgctgatggcggagacggaacgggcgggg
cagccgctgtggcaccgcgccaatctctatcagcgttttatccagaccttgacgcaaagc
cagacgcggccgcctggcttgcccgatagagtgttcatctgcggcatctcagcgctgccc
cccacttacctgcaggcgcttcaggcgttggggcgccatatcgacatccatctgctgttc
accaatccctgccgctattactggggggatatccgcgatcgcgcttttctggcgcggctg
ctgcaccgccgtcgccgacattatcagcagcagacggagcaggcgctgtttcggcgcccc
gaacaggccgccgcgctattcgacgcgctgggggagcagcaaacaggcaacccgctgctg
gcctcctggggcaaacaggggcgcgataatctttacctgctggcccagatggacggcatt
gccgaggtaaatgcatttgttgagccggcgggtgataacctgctaagcctggtgcagcgc
gatatcctggcccttgaggatcacgcggtgattggcatggacggtgaaacgctcacccag
ggcggcggtaagcggccgctgcggctggatgaccgctcgctgagcctgcatgtctgccat
agtccgcagcgggaagtggaagtgctgcacgacagcctgctggcgatgatagcggaagac
ccgacgctgcgcccgcgcgacgtgattgtcatggtggccgatatcgaccgttatacgccg
gcaatccaggcggtgttcggcagtgccggcggcgagcgctacctgccgtttgccatttcc
gacaggcgcgcgcggcatctccatcctgttttgccggcgtttctcagcctgctggaatta
ccgcgcagccgctttgccgccgagcaggtgctggcgttgctggaagtgccggcgctggcg
gcccgcttcgccattgatgagcaggggcttcaactgctgcgcctatgggtggcggagtcc
ggcattcgctgggggctggacgatgatacgctgcgcgaactgatgctgcccgccaccggc
cagcatacttggcaatttggtttgacccgcatgctgctgggctatgcgatggacagcgag
agcggcgattggcagggcattttgccctacgacgaatccagcggcttgatagccggtctg
gtcggccaactggctgagctgttgatgcggctgcgccattggcgcgaccgacttgcccag
ccccgcgcccttgacgcctggcttggctgcgcccgcgaaatgatcgaggatttctttgcc
cccgacgccgaggcggaagcggcgctggcgctgctggaaaatcaatggcagcaggtgctg
caatgcggtttgcaggtgggatatgaccagccggtgccggtgacgctgctgcaagacgag
ctggccgcgcggctggatcaggagcgggtcagccagcgctttctggccggcaccatcaac
ttttgtacgctgatgccaatgcgctcaattccgtttcgggtggtctgcctgctgggtatg
aacgacggcgtttatccgcgcacgctgccgccggcggggttcgacctgatggcgcagcag
ccacagcgcggcgatcgcagccggcgcgacgatgaccgctatctgttcctggaggcgctg
ttatccgcgcagcagcggttgtatatcagttttatcggccgtgccattcaggataatacg
ccgcgttatccgtcggtgctggtaagcgagttgagcgattatattgcgcaaagcttccat
ttacccggcgacgagcatgccgatgccgagagtagcgctgaccgggtgcgcgcgcatctg
tggcagtggcatagccgcatgcctttcgcgccggagaattttctgcccggcagcgagtcc
caaagcttcgccgacgagtggctgccggccgccggcgccgagggcgagccgcagccggat
tttgtcgcgccgttgacggcgccgccctgcgaagcgctggcgctggatgagctgctgcgc
ttttatcgccacccggtgcgcgcctggtttgtgcagcgcctggcagtctcctttcaccaa
acctcccttgagctggcggctgatgaaccctttgtcatcgacggtctgacccgctatcag
ctcaatgaccggctggtgaatgcccttatcgacggggacagcaccgatcggctgttccgc
caggtgcgcgccgccggcctgttgccttatggcgcgttcggcgagctgtattgggccaag
cagtgccaggagatgaccgcgctctctgagcaggtgcggacgtggcgattgccggaaacg
cacagtgttgaggtctttttgacgctggacgcggtgacgctctccggctggctgccgcgg
gtccaggcgaatggcttgctgcgctggcgtcccggcacgctgtcggcccgggacgggctg
ctgctgtgggtagagcacctggcctactgcgccatgggcggcgaaggcgagagccggatg
ttcggtacgcgcggcgagtggcatttcgcgccgctgcccgcctgccgggcgaaagcgttt
ttactttcgctggtttccggctactgtcagggtatggcgtcgccgctgctgctgttaccc
cgcgcgggtggcgcatggctaagccagtgttacgacccggtaacgcagagcatcgaccgc
gacgagagccggcagcggcaggcccgtgataaacttatccaggcttggcaggggaatggc
catgttcccggcgaaggcgaggatccgtatctgcagcggttgatgcgtcagctggaggaa
caacatattgaggcgattatatcggccgctgaacggtatttgctgccaccctttatgttc
aatctggcgcagagcgagccggcgaaacgcgaaaagaaagcctga
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