Shewanella oneidensis: SO_3956
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Entry
SO_3956 CDS
T00099
Symbol
kdsD
Name
(GenBank) arabinose-5-phosphate isomerase KdsD
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
son
Shewanella oneidensis
Pathway
son00540
Lipopolysaccharide biosynthesis
son01100
Metabolic pathways
son01250
Biosynthesis of nucleotide sugars
Module
son_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SO_3956 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
son01005
]
SO_3956 (kdsD)
Enzymes [BR:
son01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
SO_3956 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
son01005
]
Lipid A
SO_3956 (kdsD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AAN56930
UniProt:
Q8EAF0
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All DBs
Position
4098655..4099632
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AA seq
325 aa
AA seq
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MVDQSQLRQWGCKVIDIEKSALDNLYQYVDSAEFAQACELILNCSGKVIVMGMGKSGHIG
NKISATLASTGTPAFFVHPGEASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRKAI
PVIAMTGKPESTMARLAKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAMAIALLQAKGF
TRDDFAMSHPGGALGRKLLLKVSNVMHCGDDLPLVKHDICITDALYEISKKGLGMTAIID
EQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSRNING
LIVIDKENHPVGALNMLDMVKAGVI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtagaccaatcacaattgcgccaatggggctgtaaagtcatcgatattgaaaaatcg
gccctcgacaacctttatcagtacgtcgattccgctgaattcgcccaagcctgtgaatta
attctcaactgtagcggcaaagtcatcgtgatggggatggggaaatccggccatattggc
aataaaatctcagccaccctcgccagtacaggcactccggccttctttgtgcatccaggc
gaagccagccatggcgacttaggcgtactctctgacaacgatattattctcgccatttcg
aactcgggcgaatcaagtgaaatcctcgcactgatgcccgttatccagcgtaaagccatt
ccggtgatagccatgacgggcaaacctgagtccactatggcacgtttggccaaaattcat
ttatgcattgaagtaccagaagaagcctgcccgctcgggctcgcccccacgtcaagcacc
accgcaaccttagtgatgggtgatgcgatggcgattgcactgctgcaagctaaaggcttc
acccgagacgatttcgctatgtctcacccaggcggcgccttgggtcgtaaactactgtta
aaagtcagtaatgtgatgcactgcggcgatgacttaccgctggtcaaacacgatatctgc
attaccgatgccctgtatgaaatctccaaaaaaggcctcggcatgaccgcgattatcgat
gagcaaaacaaactcgtgggtatttttaccgatggcgacttacgccgcgtcatcgatgcc
caagtcaacctgcgcaccacaccgatcgccgatgtgatgacgcgaaactgtgtcactatt
actgaaaacgtattagcagcgcaggcgctgcaagtgatggactctagaaatatcaacggc
ctaatagtgatagataaagaaaatcatcctgtcggcgcactcaatatgctcgatatggtt
aaagcgggagtcatttaa
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