KEGG   Solanum tuberosum (potato): 102578397Help
Entry
102578397         CDS       T02981                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
sot  Solanum tuberosum (potato)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sot00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    102578397
Enzymes [BR:sot01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     102578397
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     102578397
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 1172 aa AA seqDB search
MATSAVDGGGNNSVGGEDIKFSVMVSLFQWIQKSKSSAKKRSKFRKFIDTFCRKPQDNFA
AIRLILPGLDRERGSYGLKEHVLATCLIDALAMSRESDDARRLLNWRKGGPKTGSNAGNF
SLVAAEVLQRRQGMASAGLTIKELNDFLDHLASSENRAEKTSILSDLIRKTNAQEMKWII
MIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVR
PQLALRVSNASAAWKKLYGKEVVVECKFDGDRIQIHKNNSELNFFSRNFLDHQEYAHGMS
DVITQNILADKCILDGEMLVWDASINRFAEFGSNQEIAKAAREGLDSDRQLCYVAFDILY
VGDTSVIHRSLKERQEILQKVVKPIKGRLEILVPNGGLNAHRLSGEPCWSIIARSVDDVD
KFFKGTVENRDEGIVLKDLTSKWEPSDRSGKWLKLKPDYVRPGSDLDVLIIGGYYGSGRH
GGEVAQFLVGLAEPPAPNTYPRRFISFCRVGTGISDEERNIIVTRLKPYFRKYEYPKQAP
PTFYQVTNNTKERPDVWVESPEKSIIVSITSDIRTIRTEVFAAPYSLRFPRIDKVRYDKP
WHECLDVQSFVDLVHSTNGTTQREDNYGIEQDHESKTIRSSRKREKKNVSAVPSHFVQTD
VSRIKGETSMFSDMVFYFANVPSSHTLESLHKMVVEHGGSFSMNLNKSVTHCIAAESRGI
KFQAAKLHGDVIQCSWLFVCCLQKKLLPLQPKYFLFLSDSTKKKMEAEVDEYSDSFYSDI
SIEEIKLLLRNIEHLEDSKTVEYYKKKYCPKDKWARFHGCCIYFFIPKQCLEYSDCKVLV
ELAMRRMKVEISVGGGKVCDNLFHATHVVVMSLPEFDVKFNEVLNSFSEAEKHVLYNTKL
HVVGARWLEDSFKEDQKLVEESYSLKPSNFQMSISEKSRHDKLKGDSGKCNRPSSPDKHG
GQIKAEGISDQGRAITLPKRGRKRDRGRPTGSATAKGKVGINIPRRVKRKVTSSRAKIHE
NESDESATSGEHLRNDESEAAVGSHESIAIRISGIQNEDDVQDLELSPDGKAFPPGTAEC
SVIGERLDEAYETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTLV
KDDKPEADTNPSPKKKKKVSYKDVAGELLKDW
NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt
atggcgacttccgccgtagacggtggtggtaataatagtgttggcggagaagacataaaa
tttagtgtaatggtcagccttttccagtggatacagaagagtaaatcatcagcgaagaag
cggtccaagttccggaagtttattgacaccttctgcaggaagcctcaggacaatttcgct
gccattcgccttattctccctggcctcgaccgtgagcgtggctcttatggccttaaggag
cacgtcctcgctacttgcctcattgacgcacttgccatgtcccgcgaatccgatgatgcc
cgccgtcttctcaactggcggaaaggcggtcccaaaactggctcaaatgccggcaacttc
tctcttgttgccgcggaggtcctccagcgtagacagggaatggcttctgctgggctaaca
attaaggaactaaatgacttccttgatcacttggcctcaagtgaaaatagagcagagaag
acttcaattctgtctgatctaatcaggaaaacaaatgctcaagaaatgaaatggattata
atgataattctcaaagatcttaagttgggaattagtgaaaagagcatcttccatgaattc
catccagatgcagaggacttattcaatgtcacatgcgatttaaaattagtttgtgaaaag
ttgagggacagaagtcaacggcataaacgccaggacattgaagttggaaaacctgtccgc
cctcagctggctcttagggtcagcaatgcatctgctgcatggaaaaagctttacgggaaa
gaagtagttgttgagtgtaaatttgatggggatcgcatccagattcacaaaaataattct
gagctaaacttcttttcaagaaactttctggatcatcaagagtatgctcatgggatgtca
gatgttattactcagaatatccttgctgacaagtgcatactcgatggtgaaatgttggtt
tgggatgcatcaataaaccgctttgcagagtttggttccaatcaagaaatagcaaaggca
gcaagagagggtcttgatagtgataggcagttgtgttatgttgcgttcgatattctttat
gttggggataccagtgttattcatcggagcttaaaggaacgtcaagagattctccagaaa
gttgtgaagcccataaaaggccgtttagaaattttggtccctaatggtggtctgaatgct
catcgtctttctggggagccatgttggtcgatcattgctcgtagtgttgacgatgttgat
aaattctttaaaggaactgttgagaacagagatgaaggaatagttttgaaagatttaact
tcaaaatgggaaccaagtgatcggagtggaaaatggctaaagttgaagcctgattatgtt
cgacctggctctgatttggatgttcttattatcggaggctactatggttctgggcgacat
ggaggagaggtagctcaatttctggtgggtcttgctgagcctccggctccaaatacatat
cccagaaggttcatttctttttgcagagtgggcactggaatttctgatgaggaacgcaat
atcatagtaactcgattaaagccttatttcaggaagtatgagtacccgaagcaggcacca
ccaaccttttatcaagtaacaaataatacaaaagagcgtcccgacgtgtgggttgaaagt
ccagagaaatccatcattgtttcaattacaagtgatattagaacaataagaactgaggtg
tttgctgctccatacagtttgagatttccgcgtattgataaagtcagatatgacaagcct
tggcatgagtgtcttgatgtgcaatcatttgttgatctggtacattcaaccaatggtacc
acgcagagggaggacaattatgggattgagcaggatcatgaatcaaaaaccattaggtcg
tcaagaaaacgagagaagaagaatgtctctgcagttccttctcattttgttcagactgac
gtgtctcgaatcaagggtgaaacatcaatgttctctgacatggtgttttattttgctaat
gtgccttcatcacatacacttgaatccttgcacaaaatggtggtcgagcatgggggttct
ttctccatgaatttgaataagtcagttactcattgtatagcagctgaaagtagaggtatc
aagtttcaagctgcaaaacttcatggagatgttattcagtgctcttggctctttgtctgc
tgtctgcaaaagaagctccttcctttacagccaaagtattttcttttcctttctgattca
acaaagaaaaagatggaagcagaagtggatgaatattctgattctttctactccgacatc
agcattgaagaaattaaactgcttttgagaaatatagaacacttagaagactccaaaact
gttgagtactacaagaaaaagtactgtcccaaggataaatgggctcgatttcatggttgc
tgcatttattttttcattccaaagcagtgtctggaatattcagattgcaaggttttagtg
gaacttgctatgagaaggatgaaagttgaaatttctgtgggtggtgggaaagtttgtgac
aatctttttcatgctacccatgtcgtcgtcatgtctctaccagagtttgatgtaaagttc
aatgaagtgttgaatagtttctcagaggcagagaaacatgttttgtacaatacaaagctg
catgtagttggagcacggtggttggaggattcctttaaagaggaccagaagttggttgag
gagagttatagccttaagcctagcaattttcaaatgtcaatctctgagaagagtagacat
gataagctaaaaggtgattccggaaagtgcaacagaccatcttcccctgataaacatgga
gggcaaatcaaagcagaaggaatttcagaccagggccgagctatcacgctaccaaagagg
ggaaggaaacgagatagaggaagacctactggtagtgctacagcaaaagggaaagtgggg
atcaacattccacgtagagttaaacgcaaggtcacaagtagtcgtgctaagattcatgaa
aatgaatctgatgaaagtgctacttcaggcgagcatcttcgtaatgacgagagtgaagcg
gctgttgggagccatgaaagtattgcaatacgtatctcaggaattcagaatgaggatgat
gtacaagatctggaattgtcaccagatggtaaagcatttccaccagggactgctgaatgc
agtgtgatcggtgaaagattggacgaagcttacgaaacttcatacggaagtggaaatatt
gccaggggcaaagacaaggtggatgagctggaagaccctgttgatccagtccaagctatg
ctactgcatatgataccccacttggatagtaagccaacaagaagcgtggacactcttgta
aaagatgacaagccagaggcagatactaatcccagtcctaaaaagaaaaagaaagttagc
tataaagatgtagctggtgaattgctcaaagattggtga

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