Saprolegnia parasitica: SPRG_12989
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Entry
SPRG_12989 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
spar
Saprolegnia parasitica
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spar04121
]
SPRG_12989
Ubiquitin system [BR:
spar04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
SPRG_12989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
zf-HC5HC2H
zf-HC5HC2H_2
WDR54
WD40_like
Motif
Other DBs
NCBI-GeneID:
24134900
NCBI-ProteinID:
XP_012208686
UniProt:
A0A067C1G3
LinkDB
All DBs
Position
Unknown
AA seq
1878 aa
AA seq
DB search
MFPDTKTGGQRSNSEFVSAAMDDSRDDDGSAGPRPMDRAADQRDVDMGQHDVETALAAPS
PAQVETMQPRMSAMEALDDVDTMGDDESDAPGPSDMGDIYFLIANFLRRATPCSRTAAML
EDELHSLGLLDSAVDWQGRERPATFTDVHLRHRQLPPTHLVQLLRDGARKNETTLLKPRP
PTPSTPDARRSTIQELILLWLQMRENERKILRVERLLEKFATTGTDIAEEQRGAKQLRFL
QRQLVQDKRKVDELLCRVRDWGMAMTKPFLGHNHARVLLQRERSGRSVPMAHFAASSARR
ETVPIFAYTRYRILKTLSGHLQISVYCVTFDKSGTYIITGSDDRLVKIWSARTGDLLYTL
HGHVGNITDMDINDDGSLLVTSSDDKTVRVWEIATGFAIAVLVGHTSVVNTVRFHPHLNV
VVSASDDGHCLLFRLPRITQGPRRETKTETVQRLFQQHAYCLNIKPFLVLGHVPSTNTTR
VTRACKVLCLDVSPCGTKIATGSQDGVMRLWHVGPHVLSSTAATSASTQAQIDAVVASIP
DANPEPLPEVRGRRRRVCATANVVVGDTDGADRTESAVVTEPSLVLTGHTSPITNVFFSK
HGESVATQSIKDGTTRLWQLPTTSRPKLGIHILSSPETVEGGRRQGASWSADMMMWTAHG
DRLVTLHSRKADATSLHIEQAIRIWDPTTFALVMTLRHPELAHVNAVFAMEVHPIDWRIL
LTAGYDGRICLWDISAGTLLRQYQNRDSVGDPCPILDMAFSPTGDLFAVTDRVGRLCIFG
TGAGDSYKASPRDQYFANDYAPIEMDVNLNVRDRDTQVQPHLLPRSALMDMSRSIYAQQP
LHLMLDEMRLDDYVTNRAARVAQYLELYQANLEGIVRSDENAHGNYEPFPNLIETVTPKS
VRGARGALATTQSYRVNGAPVLASEVRAPVVRRVPRDTDDRDRSVLDVVLSSDEDRDEDF
QVPATANGDDDDDDDDDDAMGDLVDEESDAGSGSDTPPRIYRTADGSRALRSRRRSSADD
DEPAPRRRRLRKRNQAQILDGPSSGEDDEIEQRMTVTSPARVSPIHDDDDELDDDGMQGA
VVESTKVPGSQRDVFDTTKTFAEMLAAKRRVDPGAQILCGFCGRGDVAGMTLPGETLGVH
PLVNGSQRVFVHDPCAITSPQSFYDDDGHWYNIAKELRRGRLLKCNLCDQKGATLGCNYD
ACTVTMHFHCALATGWKDEDTYYCGDHVHLYVPSTTVRNDPLRAMKAQLLTTQVAFEEGY
IKRIGLRYDRLYCQQVTPQPQTYVPQVGDLVVYCPQGHEFYLRFHPSKTQPAYMKFPRKV
AAVQCQIVHIAYTFPLVETYKPNQRVLMQLHLEVVALPAVYFEDDGTDADPCRRAFNVFV
PVNDNFELDDAPSRERRRFRVHMQPSHCPDFIVLFAKYALGFGAPWNVQDAVQTVLPTTD
DHGIQIDAVLNMGTVLASDRADPDVDSPWECLTVLFDDDGTVRVSPWELEPASAEARLAQ
LALAPPVPSIEGERRAGLLRALASIMQLSVALDFVPPVPESTPDYYVTVANPMDLSLIRS
RVELGYYRQVDALLADVQLILDNCEKYNVETSPIAQNARALVAAMVSILQPLFPREVAAW
QAAHVAFSRAHDEAETLETKRPPKRSSSVDGASPNPKRRCTDDAVVVQKLRLSVAQRQQW
LQRLAKGSLASHLSVLHRAIQAEDAANIFASPVTDDIAPGYSVVIPHPMDFGTMQAKLSL
YGSFAAYYEDFMLVCANATVYNEAGSYVHSEAVRMKGALSRVIGTILKGKAKAGGAGKKR
RPRRDSFDMNEMESDEESFASSENDDDDDDEPPSDSSSSSSQESSDEAPARRRRKPAKSV
YKDRSSSGSSDDDDDDDA
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgtttccggatacgaagaccggcgggcaacggagcaactcggagtttgtatcggccgcc
atggacgacagcagggacgacgatggcagcgcaggaccgcgaccgatggaccgcgccgcc
gaccagcgcgacgtcgacatgggccagcacgacgtagagaccgcgctggcggcgccgagc
cctgcgcaggtcgagacgatgcagccgcggatgagtgccatggaggcgctcgacgacgtc
gacaccatgggcgacgacgagagcgatgcgccgggaccaagcgacatgggcgacatctac
tttctgattgcaaactttctgcgtcgagcgacgccatgctcgcggacggcggcgatgctc
gaagacgagctgcacagcttgggcctcctcgactcggcggtcgactggcaaggacgggaa
cggcctgcaaccttcacggatgtgcatctgcgccaccgccagcttccaccgacgcacctc
gtccagctgctccgtgacggcgcgcgcaagaacgagacgacgctcttgaagccacggcca
cccacgccgtcgacgccggacgctcgccggtcgacgatccaggagctgatcctgctctgg
ctgcaaatgcgcgaaaacgagcgcaagattctgcgcgtcgagcgcctcctcgagaagttt
gcgacgaccgggaccgacattgcagaggagcagcgcggcgccaagcagctgcggttcctc
cagcgacagcttgtgcaggacaagcgcaaggtcgacgagcttctgtgccgcgtccgcgac
tggggcatggccatgaccaagccatttctgggtcataatcatgcgcgggtcctcctccag
cgcgagcgcagcgggcggtccgtgcccatggcccatttcgcagcctcgtcagcacgccgc
gagacggtgcccatctttgcctacacgcgctaccgcattctcaagacgctcagcggccac
ctgcaaatctccgtgtactgcgtcacgtttgacaagtcgggaacgtacatcatcacgggc
tcggacgaccggctcgtcaagatctggtcggcgcgcaccggcgacctcttgtatacgctg
cacggacacgtgggcaacatcaccgacatggacatcaacgacgacggcagcctcctcgtc
acgtcctcggacgacaagacggttcgggtctgggagatcgcgacggggttcgccatcgcg
gtcttggtcgggcacacaagtgttgtcaacacggttcggttccacccgcacctcaacgtg
gtggtctccgcgtcagacgacggccactgccttctcttccgcctcccgcgcatcacgcaa
ggcccgcgccgcgagaccaagaccgagacggtccagcgactcttccagcaacacgcgtac
tgcctcaacatcaagccgttccttgtgcttggccacgtgccgtccaccaacacgacgcgc
gtcacacgcgcgtgcaaagtgctttgcctcgacgtgagtccgtgcggcaccaaaattgca
accgggagccaagacggcgtcatgcggctctggcacgtcgggccgcatgtgctctcgtcg
acggcagcgacgtcggcctcgacgcaagcccaaatcgacgcggtcgtcgcatcgattccc
gacgccaaccccgaaccgttgcccgaggtccgaggtcgccgccgtcgggtttgtgccacc
gccaacgtcgtcgtcggcgacaccgatggcgccgaccgaaccgagagtgcggtcgtgacc
gagccgtcgctcgtgctgacgggccacacgtcgccgatcacgaatgtgtttttcagcaag
cacggcgagtccgtggcgacacagtcgatcaaagacggcacgacgcggctctggcaactg
ccgacgacgagtcgccccaagctcggcattcacatcttgtcgtcgcccgagacggtcgag
ggcgggcggcggcaaggcgcgtcgtggtcggccgacatgatgatgtggacggcccatggc
gaccgactcgtgacgctgcacagtcgcaaggccgacgcgacttcgctccacattgagcag
gcgatccggatctgggacccaacgacgtttgcgttggtgatgacgctgcggcatccggag
ctcgcgcacgtgaacgccgtctttgcgatggaagtgcacccgatcgactggcgcatactt
ctcacggccggctacgacggtcgcatttgtctctgggacattagcgccggcaccctcttg
cgccagtaccagaatcgggacagcgtcggtgacccatgcccgatcctcgacatggcgttc
tccccgaccggcgacctctttgccgtcacggaccgcgtcggccggctgtgcatctttggc
actggcgccggcgacagctacaaggcgagtccgcgcgatcagtacttcgccaacgactat
gcgccgatcgagatggatgtgaatctcaacgtccgcgaccgtgacacgcaagtgcagccg
catctcttgccgcgctcggcgctcatggacatgagtcggtcgatttacgcccagcagccg
ctgcatctgatgctcgacgagatgcgccttgacgactatgtgacgaaccgggccgcgcgg
gtcgcccagtacctcgagctctatcaagccaacttggaaggcattgtgcgaagcgacgag
aacgcgcatggcaactacgaaccgttccccaacctcatcgagacggtcacacccaagagc
gtccggggcgctcgcggggccctcgcgaccacgcaatcgtaccgtgtgaatggcgccccg
gtgctcgcgtccgaggtgcgcgcgcccgtggtgcgacgggtgccccgcgacacggacgac
cgcgatcgatcggtgctcgatgttgtcttgtcgtccgacgaagaccgtgacgaagacttt
caagtcccggcgacggccaacggtgacgacgacgacgacgatgacgatgacgacgccatg
ggcgatctcgtcgatgaagagagcgacgcgggtagtggcagtgacacgccgccgcgtatc
taccgcacggccgatggcagtcgcgcgctgcgttctcgtcggcggtcgtccgcagacgac
gacgaaccggcgccccgccgccggcgtctccggaaacgcaaccaagcacagattctggac
ggtccgtcgagcggtgaggacgacgagatcgagcaacgcatgacggtgacgtcaccggct
cgcgtgtcgccgatacacgacgacgacgacgaactcgacgacgatggcatgcaaggagcg
gtggtcgagtcgaccaaagtacccggtagccagcgcgatgttttcgacacgaccaagacg
tttgccgagatgctcgcggccaagcggcgcgtcgacccgggtgcgcaaatcctctgcggc
ttttgcggccgcggcgacgtcgccggcatgacgctgcccggcgagacgctcggcgtgcac
ccgcttgtgaacggcagccagcgcgtctttgtccatgatccgtgcgcgatcacatcgccg
cagtcattctacgacgacgacggccattggtacaacattgccaaggagcttcgccgcggc
cggctgctgaaatgcaacctctgcgaccagaagggcgcgacgctcggctgcaactatgac
gcgtgcacagtcacgatgcactttcattgcgcgctcgcgaccgggtggaaggacgaagac
acgtactactgcggcgaccacgtgcacttgtacgtgccgtcaaccacggtgcgcaacgac
ccactgcgggccatgaaggcgcagctgctcaccactcaagtcgcgtttgaagaaggctac
atcaagcgcattggcttgagatacgaccggctctactgccagcaagtgacgccgcagccg
cagacgtatgtgccccaggtcggcgaccttgtcgtctactgtccccagggccacgagttc
tacctgcgcttccacccgtccaagacacagcccgcgtacatgaagttcccgcgcaaagtc
gcggcggtgcagtgccagattgtccacatcgcgtacaccttccccttggtcgagacgtac
aagcccaaccaacgcgtgctcatgcagctccatcttgaggtcgtcgcgctgccggccgtg
tactttgaggacgacgggaccgacgcggatccgtgccgacgcgcgttcaacgtgttcgtg
cccgtcaacgacaactttgagctcgacgacgcgccatcacgagagcgccggcggttccgc
gtgcacatgcagccgagccactgccccgactttatcgttttgttcgccaagtacgcgctt
gggtttggcgcgccgtggaacgtccaggacgcggtccagacggtactacccacgaccgac
gaccacggcatccagatcgacgcagtgctcaacatgggcaccgtcctcgcgagcgatcgg
gccgaccccgacgtcgactcaccgtgggagtgtctcacggtgctctttgacgacgatggc
acggtccgcgtgagtccgtgggagctcgagccggcgagtgccgaggcgcggctggcgcag
ctcgcgctggcgccgcccgtaccgagtatcgaaggcgagcgacgcgcgggccttctgcgc
gccttggcgtcgatcatgcagctctcggtcgcgctcgattttgtaccgcccgtgcccgag
tcgacgcccgactactacgtcacggtggcgaatccgatggacctctcgctgatccgaagc
cgcgtcgagctcggctactaccggcaagtggacgcgctcttggcggacgtgcagctgatt
ctggacaattgtgaaaagtacaacgtcgaaacgagtccgatcgcacagaacgcgcgggcg
ctcgtcgccgcgatggtgtcgattctgcagccgctgttcccacgggaggtcgcggcgtgg
caagccgcccacgtggcgttctcgcgggcccacgacgaggcggagacgctcgagaccaag
cgcccgcccaagcgctccagcagcgtcgacggcgcgagtccgaatccaaagcggcgctgt
acggacgacgccgtggtcgtgcaaaagctgcggctctcggtggcccagcgccagcagtgg
ctccagcgtctcgcgaaaggctcgttggcgtcgcatttaagtgtgctccaccgggcgatc
caggccgaagacgcggccaacatctttgcgtcgcctgtcacggacgacattgcgccaggg
tactcggtcgtcattccgcacccgatggactttggcacgatgcaagccaagctgtcgctc
tacggctcgtttgccgcctactacgaggactttatgctcgtgtgtgcgaatgccaccgtg
tacaacgaagcagggtcgtacgtgcatagcgaagcggtgcgcatgaagggggcgttgagc
cgcgtgattggcacaatcctcaagggcaaagccaaggcaggtggcgcggggaagaagcgc
cgaccgcgccgcgactcgtttgacatgaacgagatggagagcgacgaagagagctttgca
tcgagcgagaacgacgacgacgatgacgacgaaccgccgagcgacagcagcagcagcagc
agtcaagagagcagcgacgaggcaccggcacggcggcggcgcaaaccggcgaaatcggtc
tacaaggaccggtccagctcgggctcgtccgacgacgacgacgatgatgatgcgtga
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