Rhizorhabdus wittichii DC-6: HY78_09570
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Entry
HY78_09570 CDS
T05200
Name
(GenBank) succinyl-CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00020
Citrate cycle (TCA cycle)
sphd00640
Propanoate metabolism
sphd00660
C5-Branched dibasic acid metabolism
sphd01100
Metabolic pathways
sphd01110
Biosynthesis of secondary metabolites
sphd01120
Microbial metabolism in diverse environments
sphd01200
Carbon metabolism
Module
sphd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HY78_09570
00640 Propanoate metabolism
HY78_09570
00660 C5-Branched dibasic acid metabolism
HY78_09570
Enzymes [BR:
sphd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HY78_09570
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GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ARR53649
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All DBs
Position
1965832..1967031
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AA seq
399 aa
AA seq
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MNIHEYQAKELLAKFGVAVPAGHAALTVDEAVEAAKKLPGPIWVVKAQIHAGGRGKGKFK
ELPADAKGGVRLSKSIDEVKANAADMLGNTLVTIQTGEAGKQVNRLYVTDGADIKSEYYL
SMLVDRKTGRIAMIVSTEGGMDIEQVAHDTPEKIRTIVIDPAEGFQPHHGRAVAFALKLK
GDLNKQAVKLAEQLYNAFIATDMSMLEVNPLVETTDGKLLVLDAKVSFDSNALYRHPDIL
ALRDETEEDPAEIEASQYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVG
GGATKEKVTAAFKIILSDPAVKGILVNIFGGIMRCDIIAEGIIAAAKEVNLSVPLVVRLE
GTNVQQGKDLLAGSGLPIVAADDLGDAARKIVAEVKKAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccatgaatatcaggccaaggaactgctggcgaagttcggcgtcgcggtcccc
gcgggccacgccgccctgaccgtcgacgaggccgtcgaggccgccaagaagctccccggg
ccgatctgggtggtcaaagcgcagatccacgcgggcggccgcggcaagggcaagttcaag
gaactgccggccgacgccaagggcggcgtccgcctgtccaagtcgatcgacgaggtcaag
gccaacgccgccgacatgctcggcaacaccctcgtcaccatccagacgggcgaggccggc
aagcaggtcaaccgcctctatgtgaccgacggcgccgacatcaaatccgaatattatctg
tcgatgctggtcgaccggaagaccggccgcatcgcgatgatcgtgtcgaccgagggcggc
atggacatcgagcaggtcgcccatgacacgcccgagaagatccgcaccatcgtgatcgac
ccggccgagggcttccagccgcaccatggccgcgccgtcgccttcgcgctgaagctgaag
ggcgatctcaacaagcaggcggtcaagctcgccgagcagctctacaacgccttcatcgcc
accgacatgtcgatgctcgaggtcaacccgctggtcgagacgactgacggcaagctgctt
gttctcgatgcgaaggtcagcttcgactcgaacgcactctatcgccatcccgacatcctc
gcgctgcgcgacgagaccgaggaggacccagccgagatcgaggcgtctcaatatgatctc
gcctatatcaagctggacggcgacatcggctgcatggtcaacggcgccggcctcgccatg
gcgacgatggacatcatcaagctcaacggcatgttcccggccaacttcctcgacgtcggc
ggcggcgccacgaaggagaaggtgaccgcggcgttcaagatcatcctgagcgacccggcg
gtgaagggcattctcgtcaacatcttcggcgggatcatgcgctgcgacatcatcgccgag
ggcatcatcgccgcggcgaaggaagtgaacctgtcggttccgctggtcgtccgcctcgaa
ggcaccaacgtccagcagggcaaggacctgctcgccggttcgggcctgccgatcgtcgcc
gccgacgacctgggcgacgccgcccgcaagatcgtcgccgaggtgaagaaggcggcctga
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