Sphingopyxis sp. 113P3: LH20_15435
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Entry
LH20_15435 CDS
T04069
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH20_15435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_15435
Enzymes [BR:
sphp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LH20_15435
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH20_15435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ALC13349
UniProt:
A0A0M3QDV3
LinkDB
All DBs
Position
complement(3118921..3120345)
Genome browser
AA seq
474 aa
AA seq
DB search
MKDVQLEKPGDFDAWRSAARRLLAGGVAPEEVGWRVGSAGASLFGEGSLPRSGAPVNLPR
ELIEVAERVICHRDADVPARLYRIIWRAAHDKQLLARGADPDIDWLRKADKAIRRDVHKM
HAFVRFRRLGEEAGRECFVAWFEPSHRIIPLAAPFFQRRFFGMDWAIVTPDARAIWRNET
LTYGPGGSRDEVPDTDVVEEQWRTYYGAIFNPARVKIAAMRAEMPKKYWKNLPEAEDIAS
LVAGAEARAERMREAAVSSANPLTEKWRTRVPEDNAPDDVSTLEGLARAVDRCKRCPLYC
NATQGVAGEGPKMARVMLVGEQPGDQEDLQGRPFVGPAGQLLDTAIAEAGLDRRQLFLTN
AVKHFKFIARGKRRLHQNPSAGEIDACRWWLDKERALVKPDLIITLGASALRGVTGKTAS
IKSMRGRVHRLDGGGQLIATIHPSFLLRMPDKRRAASERAAFVADLARARDLAA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgtgcagcttgaaaaaccgggggactttgacgcgtggcgaagtgcggcgcgc
cgcttgcttgcgggcggggtcgcgcccgaggaggtgggctggcgcgtcggctccgcgggt
gcatcgctgttcggcgaggggagccttccccggtcgggagcgcccgtgaacctgccgcgc
gagctgatcgaggtggccgagcgggtaatctgccacagggatgccgatgtgcctgcgcgc
ctctaccggatcatctggcgcgcagcgcacgacaagcagttactcgcgcggggggccgac
cccgatatcgattggctgcgcaaggccgacaaggcgatccgccgcgatgtccacaagatg
catgccttcgtgcgtttccgccgcctcggcgaggaggcggggcgtgagtgtttcgtggca
tggttcgagccatcgcacaggatcatccccttggccgctccctttttccagcggcgcttt
tttgggatggactgggcgatcgtgacgcccgatgctcgtgcgatctggcggaatgagaca
ctgacctatggtcccggcgggagcagggatgaagtgcccgacaccgacgtcgtcgaggaa
caatggcgcacctattatggcgcaattttcaatccggcgcgggtaaagatcgccgcgatg
cgcgctgaaatgcccaagaaatactggaaaaatctgcccgaggctgaggatatagcgtcg
ctcgtcgcgggtgccgaggcgcgagcggaacgcatgcgcgaagcggccgtttcttcggcg
aaccccttgaccgagaaatggcggacgcgtgtgcccgaggataacgcccccgacgatgta
tcgacgctcgaagggctcgcgcgcgccgtcgacagatgcaaacgttgcccgctttattgc
aacgcgacgcagggcgtagcgggcgaggggccgaaaatggcgcgcgtcatgcttgtcggc
gaacagccgggcgaccaggaagatttgcagggtcgccccttcgtgggcccggcgggacaa
ttgctggatacagcgatcgccgaagcggggctcgaccggcggcagctatttttgaccaac
gcggtgaaacatttcaaattcatagctcgcggcaagaggcggttgcaccagaaccccagc
gcgggcgagatcgacgcgtgccgctggtggctcgacaaggagcgggcgctcgtaaagcct
gacctgatcataaccttgggcgcaagcgcgctgcgcggcgtgactggcaagacggcaagc
atcaagtcgatgcgcggccgggtgcaccggctcgatggcggaggtcagctgatcgcgacg
atccacccctccttcctgctgcgcatgcccgacaagcgacgcgcagcgtccgagcgcgca
gcttttgtcgccgacctcgcccgcgcacgggatctagctgcctga
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