KEGG   Sphingopyxis sp. 113P3: LH20_15435
Entry
LH20_15435        CDS       T04069                                 
Name
(GenBank) DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
sphp  Sphingopyxis sp. 113P3
Pathway
sphp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sphp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LH20_15435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphp03400]
    LH20_15435
Enzymes [BR:sphp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     LH20_15435
DNA repair and recombination proteins [BR:sphp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LH20_15435
SSDB
Motif
Pfam: DUF4130 UDG
Other DBs
NCBI-ProteinID: ALC13349
UniProt: A0A0M3QDV3
LinkDB
Position
complement(3118921..3120345)
AA seq 474 aa
MKDVQLEKPGDFDAWRSAARRLLAGGVAPEEVGWRVGSAGASLFGEGSLPRSGAPVNLPR
ELIEVAERVICHRDADVPARLYRIIWRAAHDKQLLARGADPDIDWLRKADKAIRRDVHKM
HAFVRFRRLGEEAGRECFVAWFEPSHRIIPLAAPFFQRRFFGMDWAIVTPDARAIWRNET
LTYGPGGSRDEVPDTDVVEEQWRTYYGAIFNPARVKIAAMRAEMPKKYWKNLPEAEDIAS
LVAGAEARAERMREAAVSSANPLTEKWRTRVPEDNAPDDVSTLEGLARAVDRCKRCPLYC
NATQGVAGEGPKMARVMLVGEQPGDQEDLQGRPFVGPAGQLLDTAIAEAGLDRRQLFLTN
AVKHFKFIARGKRRLHQNPSAGEIDACRWWLDKERALVKPDLIITLGASALRGVTGKTAS
IKSMRGRVHRLDGGGQLIATIHPSFLLRMPDKRRAASERAAFVADLARARDLAA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgaaagatgtgcagcttgaaaaaccgggggactttgacgcgtggcgaagtgcggcgcgc
cgcttgcttgcgggcggggtcgcgcccgaggaggtgggctggcgcgtcggctccgcgggt
gcatcgctgttcggcgaggggagccttccccggtcgggagcgcccgtgaacctgccgcgc
gagctgatcgaggtggccgagcgggtaatctgccacagggatgccgatgtgcctgcgcgc
ctctaccggatcatctggcgcgcagcgcacgacaagcagttactcgcgcggggggccgac
cccgatatcgattggctgcgcaaggccgacaaggcgatccgccgcgatgtccacaagatg
catgccttcgtgcgtttccgccgcctcggcgaggaggcggggcgtgagtgtttcgtggca
tggttcgagccatcgcacaggatcatccccttggccgctccctttttccagcggcgcttt
tttgggatggactgggcgatcgtgacgcccgatgctcgtgcgatctggcggaatgagaca
ctgacctatggtcccggcgggagcagggatgaagtgcccgacaccgacgtcgtcgaggaa
caatggcgcacctattatggcgcaattttcaatccggcgcgggtaaagatcgccgcgatg
cgcgctgaaatgcccaagaaatactggaaaaatctgcccgaggctgaggatatagcgtcg
ctcgtcgcgggtgccgaggcgcgagcggaacgcatgcgcgaagcggccgtttcttcggcg
aaccccttgaccgagaaatggcggacgcgtgtgcccgaggataacgcccccgacgatgta
tcgacgctcgaagggctcgcgcgcgccgtcgacagatgcaaacgttgcccgctttattgc
aacgcgacgcagggcgtagcgggcgaggggccgaaaatggcgcgcgtcatgcttgtcggc
gaacagccgggcgaccaggaagatttgcagggtcgccccttcgtgggcccggcgggacaa
ttgctggatacagcgatcgccgaagcggggctcgaccggcggcagctatttttgaccaac
gcggtgaaacatttcaaattcatagctcgcggcaagaggcggttgcaccagaaccccagc
gcgggcgagatcgacgcgtgccgctggtggctcgacaaggagcgggcgctcgtaaagcct
gacctgatcataaccttgggcgcaagcgcgctgcgcggcgtgactggcaagacggcaagc
atcaagtcgatgcgcggccgggtgcaccggctcgatggcggaggtcagctgatcgcgacg
atccacccctccttcctgctgcgcatgcccgacaagcgacgcgcagcgtccgagcgcgca
gcttttgtcgccgacctcgcccgcgcacgggatctagctgcctga

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