KEGG   Sphingobium sp. TKS: K426_19480
Entry
K426_19480        CDS       T04965                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spht  Sphingobium sp. TKS
Pathway
spht03410  Base excision repair
spht03430  Mismatch repair
spht03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    K426_19480
   03430 Mismatch repair
    K426_19480
   03440 Homologous recombination
    K426_19480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spht03400]
    K426_19480
DNA repair and recombination proteins [BR:spht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     K426_19480
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     K426_19480
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      K426_19480
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: AMK24825
UniProt: A0A126RTA2
LinkDB
Position
1:complement(3931578..3933344)
AA seq 588 aa
MTIALNITRSIVGQPWRWRGGNGDGRDPGYRPDDLVTQLLLARGCPRDAVEAHRNPTIRH
FMPDPSLFRDMDAAAERLADAVVRGEDVRIFGDYDVDGATSAALLIRLLRDLGLAARPYI
PDRLMEGYGPSGEALVRLAGEGATLIVTVDCGAQAFEALAMAKAAGVDVVVVDHHKCGAS
LPEALALVNPNRLDEATEAAAHGHLAAVGVAFLLGAALIRVLRGRGWFAQRSEPPLMELL
DIVALGTVADVAQLKGLNRAFVAQGLKIMAKRRNIGLSALIDASRLTRAPLCHDLGFALG
PRINAGGRVGKADLGVRLLTTEDPAEAAKIAAELDQLNEERRAIEAAVQAEAEELLAAQG
NRAVALVSGAGWHPGVIGIVAGRIKEKAGRPAIVVAIDENGTGKGSGRSISGVDLGAAVL
AAKDSGLLVAGGGHAMAAGLTVAADRIDALAEFLDERLANAVAKARDDRALLIDAVLAPA
GVNPDFVAAIDAGGPYGAGWPAPLIASGPMRVIKADVVGNGHLRAIMAGDDGRSIKTIAF
RQAESDLGQAILGAPRDRRLWIAGRAKIDDWGSRPAAELHLEDAAWAD
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgaccattgcgctcaacatcacccgttcgatcgtcggtcagccctggcggtggcgtgga
ggcaatggggacgggcgcgatccgggctatcggcccgacgatctggtgacgcaattgctg
ttggcgcggggttgtccgcgcgacgcggtagaggcgcatcgcaatcccaccatccgtcat
ttcatgcccgaccccagcctgttccgcgacatggacgccgccgccgaacgcttggccgac
gcggtggtgcgcggggaggatgtccgcatcttcggtgattatgacgtggacggcgcgacc
agcgccgcgctgctgatccgcttgctgcgcgatcttgggctggctgcccgcccctatatt
cccgaccggctgatggagggctatggcccatcaggcgaagcgctggtccggctggcggga
gagggcgccacactgatcgtcaccgtcgattgcggcgcgcaggctttcgaggcgcttgcc
atggcgaaggcggcaggcgtcgatgtggtagtggtcgaccatcataaatgtggcgcgtcg
ctgcccgaagcgctggcgctggtgaaccccaatcgtcttgacgaagcgacagaagccgcc
gctcatggccatctggcggcggtgggcgtggcgttcctgctcggcgcggcgctgatccgg
gtgttgcgcgggcgcggctggttcgcccagcgatccgaaccgccgctgatggaactgctc
gacatcgttgcgcttgggacggtcgcggatgtggcgcaactcaagggtctcaaccgcgcc
ttcgtcgcgcagggtctcaagatcatggcgaagcggcgtaatatcggcctctccgcgctg
atcgacgccagccgcctgacgcgggcgccgctctgccatgatctgggctttgcactcggc
ccgcgcatcaatgcgggcgggcgcgtgggcaaggcggatctgggcgtgcggctgctgacc
accgaagacccggcggaggccgcgaagatcgccgccgaactcgaccagctcaatgaagaa
cgccgcgccatagaggccgccgttcaggctgaggcggaggaactgctcgccgcgcaaggc
aatcgggcggtggcgctggtatcgggcgcgggctggcatccgggcgtgatcggcatcgtc
gccgggcgcatcaaggagaaagcgggccgcccagccatcgtcgtcgcgatcgatgagaat
ggcaccggcaagggatcgggccgctcgatctccggcgttgatctgggcgcggcggtgctg
gcagcgaaagacagcggcctgctggtcgcgggcggtggccatgccatggcggcggggctg
acggttgcggcggacaggatcgatgcgctggccgaatttctggatgagcggcttgccaac
gcagtggccaaggctcgcgacgaccgggcgctgctgatcgacgcggtcctggcgcctgcg
ggggtcaatccggacttcgtcgccgccatcgacgcgggcggcccctatggcgcgggctgg
cctgcgccgttgatcgcttccgggccaatgcgggtcatcaaggcggatgtcgtcggcaat
ggtcatttgcgtgcgatcatggcgggcgacgacggccgctcgatcaagaccatcgctttc
cgccaggccgaatccgatctcggccaggccattctgggcgcgccccgcgaccggcggctg
tggattgcgggccgggcgaagatcgacgattgggggtcgcgcccggctgccgaactgcat
ctggaggatgccgcctgggccgattga

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