Schizosaccharomyces pombe (fission yeast): SPAC27F1.09c
Help
Entry
SPAC27F1.09c CDS
T00076
Symbol
prp10
Name
(RefSeq) U2 snRNP-associated protein Sap155
KO
K12828
splicing factor 3B subunit 1
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAC27F1.09c (prp10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spo03041
]
SPAC27F1.09c (prp10)
03036 Chromosome and associated proteins [BR:
spo03036
]
SPAC27F1.09c (prp10)
Spliceosome [BR:
spo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
SPAC27F1.09c (prp10)
Complex B
SPAC27F1.09c (prp10)
Complex C
U2 SnRNP specific factors
SPAC27F1.09c (prp10)
Chromosome and associated proteins [BR:
spo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
SPAC27F1.09c (prp10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
SF3b1
HEAT_2
Htt_N-HEAT_1
DUF3385
Vac14_Fab1_bd
XMAP215_CLASP_TOG
RRP12_HEAT
UTP20_C
DUF5742
Maestro_HEAT
UTP20_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
2541619
NCBI-ProteinID:
NP_594538
PomBase:
SPAC27F1.09c
UniProt:
Q10178
LinkDB
All DBs
Position
I:complement(4333135..4336797)
Genome browser
AA seq
1166 aa
AA seq
DB search
MSTVEDVEIERLRAERELLRRQKEAAKNSSTNGSVNIEEYDSAIDVRNDISQDEDDYKRT
NDVNDSYRLVRQYEAPKELLNEYADESYDPMQERQSKKQIQDRESDYQKQRYDRQLTPTR
VDAFQPDGTQSNGRSYAEVMRQVELEKEERRVHMELNQRRREGTLKEVEEEESISDKKRE
LELNNTEISQKPKRSRWDQAPPSVTQVSTTKRRSRWDKAPENFTISEHVIENGISEDLIN
KEVNVVEEKLRPPVRLLTEEELNELLPSEGYAILEPPPGYLESIHPELLQKGTTLDTYHV
PQEQELPLEKELPAALPTEIPGVGDLAFFKQEDVKYFGKLLKVEDEAKLTIAELRERKIL
RLLLKVKNGTPPMRKSALRQLTDQARDFGAAALFNQILPLLMERTLEDQERHLLVKVIDR
ILYKLDDLVRPFTHKILVVIEPLLIDEDYYARAEGREIISNLAKASGLAHMIATMRPDID
HVDEYVRNTTARAFSVVASALGVPALLPFLKAVCRSKKSWQARHTGVRIIQQIALLLGCS
ILPHLKNLVDCIGHGLEDEQQKVRIMTALSLSALAEAATPYGIEAFDSVLKPLWSGVQRH
RGKSLAAFLKATGFIIPLMEPEYASHFTRRIMKILLREFNSPDEEMKKIVLKVVSQCAST
DGVTPEYLRTDVLPEFFHCFWSRRMASDRRSYKQVVETTVVLAQQVGSRQIVERVVNNFK
DESEPYRKMTAETVDKVIGSLGVSEIDERLEELLLDGVLFAFQEQSVEEKVILTCFSTVV
NALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIVLKACGEEALMRKLGVVL
YEYLGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPILRNRHEKVQENTIDL
VGKIADRGSEYVSAREWMRICFELIDMLKAHKKSIRRAAVNTFGYISKAIGPQDVLATLL
NNLKVQERQNRVCTTVAIAIVAETCMPFTVVPALMADYRTPEMNVQNGVLKSLAFMFEYI
GEQARDYVYAITPLLADALMDRDAVHRQTAASVIKHLSLGCVGLGVEDAMIHLLNILWPN
ILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHPSRKVRNTYWTSYNSAYVQSAD
AMVPYYPHVDDDQFNNYDMKTLHICI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgtagaagatgtggaaatagaaaggcttcgtgctgaaagagaacttttgcga
agacaaaaagaggcagcgaagaattcgtcgacaaatggaagtgtaaatattgaagaatat
gactccgcaattgacgtgcgcaatgatatctctcaggatgaagacgattataaacgtaca
aacgatgttaatgatagttatcgtttagtgcgtcaatatgaagcacctaaggaactacta
aatgaatacgctgatgaaagttatgaccctatgcaagagagacagtcaaaaaagcaaatt
caggatcgcgagtcagattatcaaaagcagcgttatgatagacagcttactccaacccgc
gtagatgcttttcaacctgatgggacacagagcaatggaagatcttatgcggaggttatg
cggcaggttgaattagaaaaggaagagcgacgagttcatatggaattaaatcaaagacgt
cgtgaaggaacactaaaagaggtggaggaggaggaaagcatatcggacaaaaaaagagaa
ctagagcttaataatacggaaatatctcagaagcctaaacgctctcgttgggatcaggct
ccacctagcgttacgcaggtttccactactaagcgtagatcacgttgggacaaagctcct
gaaaacttcactatatctgaacatgttatagaaaacggaatttctgaagatcttattaat
aaggaagtaaatgtagtagaagaaaaattacgacctcctgtccgtttattaactgaagaa
gagttaaatgagcttttgccgtcagaaggctatgctattttggagcctcctcctggatat
ttagaatcaattcatcctgaactacttcaaaaaggtactacgctcgatacatatcacgtt
ccacaagagcaagagcttcctttagaaaaagaattaccagctgcattgcctacagaaata
cccggtgtaggtgatttagctttttttaagcaagaagatgttaaatattttggcaagtta
ctcaaggtggaggacgaggccaagcttacaattgcggaacttcgtgaacgtaaaattttg
agattacttctgaaagtaaaaaatggtactcctcccatgcgtaagagtgcattacgccag
cttacggatcaagctcgcgactttggtgcagctgctttatttaatcagattcttccgttg
ttaatggaacgaacactggaagatcaggagcgccatcttttagttaaggttattgatcgt
atattatacaaattggatgatctggttcgcccttttactcataaaattctcgtagttatt
gaaccccttcttattgatgaagattactatgcacgtgctgaaggtcgggaaatcattagt
aacttagctaaagcttccggcttggctcatatgattgctacaatgagacctgacattgat
catgtcgacgaatatgtccgaaacaccacagcccgtgccttttcggttgttgcctctgca
ctaggcgtgccggctcttttaccttttttaaaagctgtttgtagaagtaagaaatcatgg
caagccaggcatactggcgttcggattattcaacagattgctctgttattaggatgctct
attttaccacacttaaaaaatttagttgattgtattggtcacggccttgaagatgaacaa
caaaaagtacgaattatgacagctttgtccttatcggctttagctgaagctgctactcct
tacggtattgaagcttttgacagcgttttaaagccattatggtcaggagtccaaaggcat
cgtggtaaaagcttagccgcctttttaaaagcaaccggttttattatccctcttatggaa
cctgagtatgcaagtcattttacacggcgtatcatgaaaattcttctacgtgaatttaat
tcaccagacgaagaaatgaaaaagatagttctcaaagttgtatcacaatgtgcatctact
gatggagtaacacctgagtatttgagaactgatgtgttgcctgaattttttcactgtttt
tggtcccgaaggatggcatcagatcgtcgcagctacaagcaagttgttgaaactacagtt
gttcttgctcaacaagtaggttcccgtcaaattgttgaaagggtcgtcaacaactttaaa
gatgaatccgagccatatcggaagatgaccgctgaaactgtcgataaagtgattggctct
ttaggtgtttccgagattgacgaaagattggaagagctactgttggatggtgttttattt
gcttttcaggagcaatccgttgaggagaaagttattttaacttgctttagtactgttgtt
aatgctcttggtacaagatgtaagccgtatcttcctcagatcgtttctactatattgtat
cgtttaaacaataagtctgctaatgtccgcgaacaagctgccgacttagtttccagtata
accattgttttaaaggcatgtggtgaagaagcattaatgcgtaaacttggtgttgttttg
tacgagtatcttggtgaagaatatccagaggttctgggctcaattcttggtgctattaaa
gctattgtttccgttgttggtatgtcttcaatgcaacctcctattcgtgatttgttacca
agattgactcccatcttgaggaaccgtcatgaaaaggtccaagagaatacaattgatctc
gttggcaaaattgcagatcgtggatcggaatacgtgtccgctagggaatggatgcgtatt
tgttttgaattaattgatatgcttaaagcacataaaaagagtattcgccgtgctgctgtc
aacacatttggttatatatcaaaagccatcggacctcaagacgtgctggctactttgtta
aataatctcaaagtccaggaacgccaaaatcgtgtatgtactactgtagctattgctatc
gtggcagaaacatgtatgccttttacagtcgtaccagcacttatggcagactacagaact
ccagaaatgaacgtgcagaatggtgttttaaagtcattagcgtttatgtttgaatacatt
ggtgagcaagcacgcgactatgtttatgccattacacctcttttagccgatgcgcttatg
gatcgcgatgccgtgcatcggcaaaccgccgcttctgtaatcaagcacttgtctcttggt
tgtgttggtttgggtgttgaagacgcaatgattcatttacttaatatcctatggccaaat
atcttggaggaatcgccccatgttatcaatgccgttcgggaaggcattgatggcatccga
aattgtatcggtgtaggtccaattatggcatatttagtacaaggattatttcatccgagt
cgtaaagttcgtaacacttattggacaagctacaattctgcttatgtacaaagtgcagat
gctatggtaccatactatccccacgttgatgacgatcaattcaacaactacgatatgaaa
actttacatatttgcatctaa
DBGET
integrated database retrieval system
