Schizosaccharomyces pombe (fission yeast): SPBPJ4664.04
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Entry
SPBPJ4664.04 CDS
T00076
Name
(RefSeq) putative coatomer alpha subunit protein
KO
K05236
coatomer subunit alpha
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
SPBPJ4664.04
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spo04147
]
SPBPJ4664.04
Membrane trafficking [BR:
spo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SPBPJ4664.04
Exosome [BR:
spo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SPBPJ4664.04
Exosomal proteins of bladder cancer cells
SPBPJ4664.04
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Coatomer_WDAD
COPI_C
WD40
ANAPC4_WD40
NBCH_WD40
Prok-RING_1
YqeH-like_C
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
2541412
NCBI-ProteinID:
NP_595279
PomBase:
SPBPJ4664.04
Ensembl:
SPBPJ4664.04
UniProt:
Q96WV5
Structure
PDB
LinkDB
All DBs
Position
II:701799..705817
Genome browser
AA seq
1207 aa
AA seq
DB search
MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIA
FHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIR
IWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMS
LEDQLAQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWR
MTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDR
FWFITVHPKLNLFAAAHDSGVMVFKLERERPAHALNINTLLYVNKEKSIVSYDLLRAQST
TVASVKHLGSAWLPPRSLSYNPAEKVALLTSSADNGVYELVNVSSRSNSLPLKDNIKGPG
DDAIFVARNRFAVFSRSDQTIEIKDLSNKVTKTIQLPEKTRDIFFAGMGHVLLSTATQVH
LFDLQQKKIVSSFNANRVKYVVWSNDNSQAALLGKHYVYIVKKNLELITSIHETIRIKSA
VWVENNVLLYATLDHLKYALMSGDTGVIKTLESTLYLVKAKGNMVFALNRAAEPVSFEID
PTEYLFKLALLRKDYEQVLHLIQNSNLVGQAIIAYLQKKGYPEIALQFVEDPSTRFELAL
ECGNLETALELARTIDRPEVWSRLASDAMSYGNHKIAEITFQKLRYFEKLSFLYLITGNA
EKLQKMAIIAEKRNDTLSLFQNSLYLNEVESRINILEQAGMYPIAYLTAKSNGLEEKAQQ
ILSHCNKTEEEIKLPSLGSAFTTPVPVNETYTHNWPLLDTSHSTFEKSLQERMEQLAIER
QEEQESEEEYEEVEQSLMDVVDEMSDLAESVPEEEVDGWEVEDLAPEEAVNDVVDDASAF
VGADEIFLWKRNSPLAADHIAAGDFESAMKILNKQVGAINFSPLKTRFLEIYTASRVYLP
TISGLDPLVSYVRRNAETAERSQALPFITRNLASIKSHELHEAYRLVKANKILEAQICFR
SIIYLALTTVANSEEEADEISALIDECCRYIVALSCELERRRLGEEDTKRALELSYYFAS
ADLQPMHSIIALRLAINASHKLKNYKSASFLGNKLLQLAESGPAAEAANRAITLGDRNPH
DAFEIEYDPHVEMRICPKTLTPVYSGDDFDVCSVCGAVYHKGYVNEVCTVCDVGGIGQKG
TGRRFFA
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctaacaaaatttgagtcgcgctcatctagagccaaaggcgtcgcatttcat
ccgacacagccttggattttgacgtcgttacacaatggaagaattcaactttgggactat
cgaatgggtacgcttttagatcggtttgatggccatgatggacctgtacgtggcattgca
tttcatcctacacaaccattatttgtgtcaggcggtgatgattataaagtgaacgtatgg
aattacaaatcaagaaaacttttattttcattatgtggacatatggactacgttcgtgtt
tgtaccttccatcatgaatatccatggattttgtcttgttccgatgatcagacgattcgt
atttggaattggcaatcccgcaactgtatcgctatattaactggccattctcactatgtt
atgtgtgctgcctttcatccttctgaggatctgattgttagtgccagtttggatcaaaca
gttcgcgtttgggacattagcggtcttcgcatgaagaatgcagctccggttagtatgtcg
cttgaagatcagctagctcaggcccacaactcgatttctaatgacttatttggtagcaca
gatgctatcgtaaaatttgttttagaaggtcatgatcgaggcgtgaactggtgcgctttc
catccaactcttcctttaatcctctctgctggcgatgatcgacttgtaaaattatggcgt
atgactgcttctaaagcttgggaggttgatacgtgtcgtggccattttaataatgtttct
tgctgcttgttccacccacatcaagagctcatattgtcagccagtgaagacaaaactatt
cgtgtttgggatttgaatagaagaaccgccgttcaaactttccgtcgcgataacgaccgt
ttttggtttattactgttcatcccaaattgaatttatttgcagctgctcatgatagtggt
gttatggttttcaagctggaacgtgagcgccctgcacatgcgcttaatatcaatactctt
ctttatgtcaataaggagaagtcaattgtttcttatgatcttttacgcgcacaaagtact
actgtcgcttctgttaagcacttgggaagcgcatggctacctcctcgttctttgtcttac
aaccccgctgagaaagttgctcttcttacttcttctgctgataatggcgtttatgaactt
gttaatgtatcatcacggtctaattccttgcctttgaaggataacattaagggtcccgga
gatgatgcgatttttgtagcacgtaatcgttttgctgtcttttctcgaagcgaccaaacc
atcgagattaaggatctttcgaataaagttacaaagaccattcagcttcctgagaaaaca
agagacattttctttgctggaatgggtcatgtgctcttatctaccgctacccaagttcat
ttgtttgatcttcaacaaaagaaaattgtttcatcttttaatgccaaccgcgtaaagtat
gttgtatggtcaaatgataattcgcaggctgctctattaggaaagcattacgtgtacatt
gtgaagaaaaacttggaattaattacctctattcatgaaaccattcgcattaaaagtgct
gtttgggtagagaataacgttttactttatgctactttagaccatcttaaatatgcatta
atgtctggtgatacaggtgtcataaaaactctggaatctactttgtatttggtcaaagca
aaaggaaatatggtttttgctctcaatcgtgctgctgaacccgttagttttgaaatagat
cccactgaatatttgttcaaattagccttgttaagaaaggattacgaacaagttcttcat
ttaattcaaaattctaacctcgttggtcaggctattatagcttatcttcagaagaagggt
tatcctgaaatcgctttacaattcgttgaggatccatccacccgatttgaattggcatta
gagtgcggaaacttggaaactgctttagagcttgcccgtacgattgaccgacctgaggtt
tggtctcgtttagcttccgacgctatgtcttatggcaaccacaaaattgcagaaattacc
tttcagaaactccgttattttgaaaaactttctttcctttatttgattactggcaatgct
gagaagcttcaaaaaatggcaataattgccgaaaaaaggaatgataccctaagtctgttt
caaaacagtctctatttaaatgaagtggaatctcgtataaatatcttagagcaggctgga
atgtatcctatcgcttatcttaccgcaaaatctaacggtcttgaagagaaagcccagcaa
atactatcacattgcaataagactgaagaggaaattaaattgccatctctcggttcagca
ttcacgactcctgtacccgttaacgaaacatacacccataattggcctttgctcgacacc
tctcattctaccttcgaaaaatcactacaagagaggatggagcaacttgcaattgaaaga
caagaggaacaagaatctgaagaagagtatgaagaagttgagcaaagtcttatggatgtt
gttgatgaaatgagtgatttggcagaaagcgttccagaggaggaagttgatggatgggag
gtcgaagatttggctcctgaagaagctgttaacgatgtagttgatgacgcatctgcattt
gtcggtgcggacgaaattttcttgtggaaaaggaattccccattggcagccgatcatatt
gctgccggtgattttgaaagtgctatgaagattttaaacaagcaagttggagccatcaac
ttttctcctttgaaaactcgatttttagaaatatacactgcctcccgcgtatatttacct
actataagcggcttagatcctttagtttcttatgttcgtagaaacgctgagactgcggaa
cgttcacaagccttgccattcattaccaggaatcttgcatctattaaatcgcacgaactt
cacgaagcgtaccgtttggtgaaagctaataagattctggaggcacaaatttgcttccgt
agtatcatttacttggccttaactaccgtagcaaattcggaggaagaagcagatgaaatt
tctgctttaatagatgaatgctgtagatatatagtggcattatcgtgcgagttggagcgt
cgacgtttgggagaagaggatacaaagcgtgcactcgagctttcttattactttgcttct
gcggacttgcaacctatgcactccatcatcgccctacggttggcaattaatgcttcacat
aagctgaaaaattacaaatccgcatcgtttttgggaaataagctattgcaacttgctgaa
agtggtcctgcagctgaagcagccaaccgcgccattaccttaggtgaccgaaaccctcat
gatgcctttgaaatcgaatatgatccacacgttgaaatgcgtatttgtcccaagacttta
actcctgtatattctggagatgattttgatgtttgttccgtttgcggtgccgtatatcat
aaaggctatgtcaatgaagtttgtacggtatgtgatgtcggtggtatcggtcaaaaaggt
actggtagaagattctttgcataa
DBGET
integrated database retrieval system