Spongiibacter sp. IMCC21906: IMCC21906_01688
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Entry
IMCC21906_01688 CDS
T03945
Name
(GenBank) DNA/RNA helicase, superfamily II, SNF2 family
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spoi03021
]
IMCC21906_01688
Transcription machinery [BR:
spoi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IMCC21906_01688
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
Tudor_RapA
DEAD
Flavi_DEAD
Flavi_capsid
Dfp1_Him1_M
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
AKH69364
UniProt:
A0A0F7M5E1
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All DBs
Position
complement(1817778..1820687)
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AA seq
969 aa
AA seq
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MSLVFLPGQRWISNPEPDLGLGIILEAVNRRVVIAFPAAEEERTYAAQAAPLSRVQFQNG
DEISVPDQGRLVVTDQQEHNGCIVYFAEDDQGEIHPVPEQILSAVISLSGPKERMLAGQL
EHPKRFELRAATLEQRNTAQAANTFGLLGPRVQLLPHQLYLAKEIASRPQPRALLADEVG
LGKTIEAGLIIHQLLLSERAKRVLVMVPDSLVHQWLVEMLRRFNLHFTVLDEARCALGDE
PEDLFAMDDMDDEPDEAALAALESKEDNPFESAQLVICSVDWLTDDVQRRQQALDAGWDV
MVVDEAHHLDWQEDGSSSAEYQCVEQFAGQIASVLLLTATPENTGVEGHFARLRLLDPER
FSSLTDFKEEQAAYEGISDLIQGLLDAPEQNLQDKAFCTALADYLDDEQLTSLQNQADAE
SIDNTVRDLLDRFGTGRLLFRNTRNSVGGFPARQLQAHPLAAPADYVTAAADASLTELLR
PEQLLGDNWLKTDPRVQWLEKYLLQLDDEKVLLICADANTAQDLELYLRIRRGIPSALFF
EGLSLLERDRAAAYFADPEDGAQLLVCSEIGSEGRNFQFAQHLVLFDLPLNPDLLEQRIG
RLDRIGQQGDIQLHVPYYQDSAQQRLLSWYNDALGIFQSPCTIGDAMMTHFGSELQQELK
TASANFDALLSQAKEQAQNLRDSLSRGRNRLLELNSCKPDEARALVEQLEAEQRSDALAS
YIEIFTDQFGLEHEEHSENAVILRPGDHMQIDALPFLPEEGITGTFDRDRALSREDMAYF
SWEHPLVRSAMDIILSGDFGSASLCTLPVKGLKPGTLLLEVFFNPALHAPAWLQLQRQLP
AQSLRLVIDNDLRDLSKGVAHSKLNQLCKSVKKTLAPALLREVRESLGTMIQHLESQAKT
ESENWQQQALANYRQERDQERQRMVHLMDRNPDIDDAALAKFDDDSQRGEDALSSLKLNM
AALRLAVVS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagtctttcttcccggccagcgctggatcagtaaccccgaacccgatctggga
ttgggcattattctagaagcggtaaaccgccgtgttgttatcgcctttcccgccgcagaa
gaagaacgaacctacgctgcccaagccgcacccttatctcgggtgcagtttcaaaatggt
gatgaaatctcagtgcctgatcagggccgtcttgtcgttaccgaccaacaggaacacaac
ggttgcattgtgtattttgccgaggacgaccagggtgaaatccaccccgttcccgaacaa
atactgagtgccgttatcagtcttagcggccccaaagagcgcatgctggcaggtcagctg
gagcacccaaagcgctttgaactaagagccgccaccctggagcaacgcaataccgcccaa
gcggccaatacctttggcctactcggcccccgggtccagctgctcccccaccagctttac
ttggctaaagaaattgccagccgtccacaacctcgggcattgttagcggatgaagtggga
ctgggtaaaaccatagaagccggtttaattattcaccagttattgctgagcgagcgcgct
aagcgcgtgttggtgatggttcccgacagtctggttcatcaatggctcgtagaaatgctg
cggcgttttaacctgcactttacggtactggacgaagcccgctgcgcattgggcgacgag
ccagaagacctattcgccatggatgacatggacgatgaacccgacgaagccgcgctagcg
gcactggaaagcaaagaagacaacccctttgagagcgcccagctggtcatttgctcggtg
gattggttaaccgatgatgtccagcgccgacagcaagcattagatgcgggctgggacgta
atggtagtggatgaagcacaccatctggactggcaagaagacggcagctcctcggccgag
tatcaatgcgtagagcaatttgccgggcaaattgcatcggttctgctgctcacggcgacc
cctgaaaataccggtgtcgaaggtcacttcgctcggctgcgactgctagaccctgagcgt
ttttctagccttaccgactttaaagaagagcaagccgcctacgaaggcatcagcgattta
attcagggcctgctcgacgcgcccgaacaaaacctgcaagacaaggcattttgtacagcc
ttggccgattacctcgacgacgagcagcttacgtccttacaaaaccaggccgatgccgag
agcatcgacaataccgttcgcgacctgctggaccgctttggcaccggccgactcctgttt
cgcaacacacgtaactccgtgggcggtttccccgccagacaactacaggcacacccctta
gctgcccccgcagattatgtaaccgctgcggccgatgcctcattaacggagttgctacgt
cccgaacagctgctgggtgacaactggttaaaaacagaccccagagtacagtggctagaa
aaatatttgctgcaactcgacgacgaaaaagtgttgctcatctgcgccgacgccaacacc
gcccaggatcttgaactgtatttgcggatacgccggggcattcccagtgcactctttttt
gaaggtctcagcctgctggagcgagatcgcgccgccgcctattttgcagacccggaagat
ggcgcccaattattagtgtgctcggaaattggcagcgagggccgcaactttcagtttgcc
caacatctggtgttatttgacttacccctcaatcccgacttgctggaacaacgcattggt
cgactcgaccgtatcggccaacaaggtgatattcagctccacgtcccctattaccaagac
agcgcccaacagcgcttactaagctggtacaacgacgcattgggaatctttcaatcgccc
tgcaccatcggcgatgccatgatgacccactttggtagcgagctacagcaagagctgaaa
acggccagcgccaattttgatgcgctgttaagccaagcaaaagaacaggcacaaaatctg
agagacagcctcagccgtggccgcaaccgtttgctggagcttaactcctgcaaacccgac
gaggctcgagccttagtagagcaactcgaggccgaacaacgcagcgatgcgctagccagc
tatatcgaaatatttaccgaccagttcggcttagagcacgaagaacacagtgaaaacgcc
gtgattcttcgccccggcgaccatatgcaaattgacgcgctgccctttttgccagaagaa
ggcatcaccggtacctttgatagagaccgggcgctgagccgagaagacatggcctacttc
agctgggaacacccgctagtgcgcagcgccatggatatcattctcagcggcgactttggt
agcgcctcgctgtgtacactgccggtaaaaggtttaaaaccgggaacactgttattagaa
gtcttcttcaaccccgccttacacgctccggcatggctgcaactgcaacgccaattaccg
gcccaaagcctgcgtttggtcatagacaacgatctgcgcgacctcagtaaaggtgtggcc
cacagcaaattgaaccaactgtgtaagagcgtaaagaaaaccctcgctccggcgctatta
cgagaagtgagagaaagcctcggcacgatgatccagcacttggaaagtcaggccaaaacc
gagtcggaaaactggcaacaacaggcactggcaaactatcgtcaggaacgcgatcaagaa
cgtcaacgcatggtccacttaatggaccgcaatcctgatatcgatgacgcggctctggca
aagtttgacgacgatagtcagcgtggtgaagacgccctcagttcactcaaactcaatatg
gctgccctacgccttgcggtcgtcagctaa
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