Streptococcus pneumoniae R6 (avirulent serotype 2): spr0025
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Entry
spr0025 CDS
T00060
Symbol
radA
Name
(GenBank) DNA repair: sensitivity to gamma and UV radiation
KO
K04485
DNA repair protein RadA/Sms
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spr03400
]
spr0025 (radA)
DNA repair and recombination proteins [BR:
spr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
spr0025 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Lon_C
AAA_22
AAA_16
GvpD_P-loop
AAA
ABC_tran
AAA_14
AAA_24
SLFN-g3_helicase
nSTAND3
NTPase_1
RecA
MCM
TniB
NACHT
ATPase_2
AAA_5
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AAK98829
UniProt:
Q8DRP0
Structure
PDB
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All DBs
Position
25849..27111
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AA seq
420 aa
AA seq
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MEEVEVAEVKNARVSLTGEKTKPMKLAEVTSINVNRTKTEMEEFNRVLGGGVVPGSLVLI
GGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQ
SVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGH
VTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEV
LNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRASL
IMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGEL
GLTGEIRRVNRIEQRINEAAKLGFTKIYVPKNSLTGITLPKEIQVIGVTTIQEVLKKVFA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaggttgaggttgccgaagttaagaatgcgcgtgtgtccttgacaggtgagaaa
accaagcccatgaaactagctgaggtgacttccatcaatgtcaatcgaaccaagacggag
atggaggaattcaaccgtgtgcttggaggcggagtggtaccaggaagtctcgtccttatc
ggtggggatcctgggattgggaaatcaactcttctcctacaagtctcaacccagttgtcc
caagtggggacagttctctatgtcagtggggaggagtctgcccagcagattaaactacgt
gcagagcgcttaggtgatattgatagtgagttttatctctatgcagagaccaatatgcag
agtgttcgtgcagaagtggagcgtatccagccagactttctcattattgattccatccag
accatcatgtctcctgagatttcaggggtgcaggggtctgtttctcaggtgcgtgaagtg
accgctgaactcatgcagttggccaagaccaataacattgccatctttatcgtaggtcat
gtgaccaaagaaggaaccttggctgggcctcgtatgttggagcatatggtggatacggtg
ctttactttgaaggggagcgtcaccacacctttcgtattttgagagcggtcaaaaatcgt
tttggttccactaatgagattgggatttttgagatgcagtcgggcggcttggttgaggta
ctcaatccgagtcaagttttcctagaagagcgtttggatggggcgactggttcctccatc
gttgtaaccatggaagggacgcgtccgattttggcggaggttcaggctttggtaacaccg
accatgtttggaaatgccaagcgtactacgacaggacttgattttaaccgtgctagcttg
attatggctgttttggaaaaacgggcagggcttctcttgcaaaatcaggatgcctatctc
aaatctgctggtggtgttaaattggatgaacctgcgattgacttggctgttgcagttgct
attgcttcgagctacaaagacaagccaactaatcctcaggaatgttttgtcggagaactg
ggcttgacaggagagattcggcgcgtgaatcgtattgagcaacgcatcaacgaagctgct
aaactgggctttactaagatttatgtacctaagaattccttgacaggaatcactctgcct
aaggaaattcaggtcattggcgtgacaacgattcaggaagttttgaaaaaggtctttgca
taa
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