KEGG   Strongylocentrotus purpuratus (purple sea urchin): 373269
Entry
373269            CDS       T01019                                 
Symbol
COLP4alpha
Name
(RefSeq) alpha2(IV)-like collagen precursor
  KO
K06237  collagen type IV alpha
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:spu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    373269 (COLP4alpha)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spu04147]
    373269 (COLP4alpha)
   00536 Glycosaminoglycan binding proteins [BR:spu00536]
    373269 (COLP4alpha)
Exosome [BR:spu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   373269 (COLP4alpha)
Glycosaminoglycan binding proteins [BR:spu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   373269 (COLP4alpha)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 373269
NCBI-ProteinID: NP_999676
UniProt: Q26640
LinkDB
AA seq 1747 aa
MLYFSSSLRSLWRWSVLVIFLLVIVQSSKAQERRCDDTCRKCNCKGRKGGRGPPGFVGNK
GTPGPPGADGEQGVPGLKGDGGFPGESGSRGPKGDLGRSGIPGFSGHKGYTGVPGPHGVQ
GTPGIPGCNGSQGVPGPQGPGLIGPPGDKGPDGFKGRPGTPGLFTPSPRGEVGEDGVPGQ
DGRPGFDGFIGNGGSKGDRGPKGRQGMGGDPGESGTPAERPTVLPRGEKGDQGDPGPAGP
RYVDKTPDDNTLDGAKGAKGYKGEYGPRGMDGMKGATGEVGDLGSYGDYGEKGLPGYSGE
RGFPGNPGIPGLLGMNGEKGRDGPQGRPGYDGYKGPSGDYGMDGDPGPAPDIEEIVVGVG
PPGDEGPPGNPGPRGFSGAIGLFGDQGQPGYPGPMGGPGPRGPTGSQGEGRDGEKGESGR
PGIPGFQGETGERGNDGNFGERGEKGNMGESRPGPPGMDGSRGRQGFMGQKGGRGPPGRA
GPAGPARSGNQSFQGFPGDTGNTGLKGMRGIQGALGRDGRPGSKGELGGICPFCPPGIKG
YPGDRGYPGDPGSPGQDGAPGVEGLKGNPGEVGFIGLDGNNGNQGPPGQPGPDGSPGLNG
EPGQPGPYRRGQQGPKGYAGPKGATGVPGVMGTVNLKVPVGINLTGETGDQGPRGPDGRD
GLQGPQGFQGEEGSRSYGPNGERGRPGDPGPPGEEGPKGRAGPPAIRPDEPKGFQPGLYG
EPGPRGPIGRPGLPGFDGEPGPRGDPGFAGFPGGIGDTGPAGRSTFGPKGFPGIRGDKGV
EGRFGRTGENGPQGGPGPVGLYGLKGAPGEAGPDGFPGTSGPQGLPGTPGDAGIKGEKGL
GGTPGISGFPGFEGQRGDRGDYGPDGFPGGPGLRGENSQGPPGLPGPQGPDGRPGRKGLP
GSLGAKGERGFTGEFGLRGEPGDPGVPGVPGRKGFNGYNGRPGRGGSPGSLGPRGEIGDP
GPGGVNGPPGPPGIIGVRGVPGDLGDLGPSGFPGFQGRPGQNGMFGNRGPRGLSGGPGDA
GYPGFQGMEGSRGFDGNPGPEGNIGNPGPSGRVGEPGIPGADGFPGGPGLAGADGERGQM
GGIGDVGPPGPGGEPGPRGDFGTPGIPGNSGLVGLPGRRGETGPDGPSGETGPLGIKGYP
GNPGRNGFPGLRGARGEKGDDPEIRIPTEVNRGEAGAPGDPGPTGLGGIVGDVGPQGGNG
FPGRRGIPGIEGPPGPEGEPGLPGLVGFRGPIGEDGPKGGPGPNGETGESGLKGFPGYNG
IRGQKGNSGRGGFPGFPGEPGGAGEIGSQGPRGAKGYPGLKGDRGIPAPIGSRGEPGTPG
TPGGPGERGYSGRPGFEGPKGLQGMKGDLGEQGPPGPLPPDLGPGPQGMQGVPGIPGLRG
YKGFVGDFGVIGVIGEKGTKGRPGIFGLKGAPGPPGQPGFNGVKGDGGDPGLAQKGLKGE
QGEQGFAGFPGRIGLPGIDGPLGPPGPKGRDGLFGDFGPSGLPGRNGEPGMPGFPGDSGE
SGYGGRPGSPGPKGMGGNTGIRPNRGHFITRHSQSRNVPSCPAGTVELWRGFSVLFSMGN
GHAHHQDLGDAGSCLQRFSTMPFLFCNFNNVCNYASRNDRSYWLTTNEPLPMMPLMNQQI
DPYISRCTVCEAPTQSLAIHSQSQEIPQCPGGWRSLWTGYSFTMYTAASEGGGQGLESVG
SCLENFRATPFIECNGRGNCHFFSNEYSFWLTVIDEEDQFAIPRKRTIKSGQLQSVVSRC
RVCQKVN
NT seq 5244 nt   +upstreamnt  +downstreamnt
atgttatattttagttcgtcattacggagtctatggaggtggtcggtgttggtgatattt
cttctagttattgttcaatctagtaaagcacaagagagacggtgtgatgatacatgcaga
aagtgcaactgtaaaggcagaaaaggaggaaggggcccaccaggcttcgtcgggaacaag
ggaactccaggcccaccaggtgcggacggggaacaaggagttccaggtctaaagggagat
ggaggcttccctggggaatcaggttctaggggacccaaaggagatctaggtcgatcaggt
ataccaggtttttcaggccataaaggatacacaggtgtaccaggcccgcatggtgttcaa
ggtactccaggtatcccaggatgcaacgggagtcagggagtaccaggaccacaaggtcca
ggactaattggacccccaggagataaaggccctgatggtttcaaaggacgacctggcacc
ccgggtctgttcacaccatcacctagaggtgaagttggtgaagatggggtacccggacaa
gacggtcgacctggctttgatggcttcatagggaacgggggatccaaaggagatagagga
cctaaaggacgacagggcatgggtggagatccaggagaatcaggcacacctgctgaacga
cccactgttctacctaggggagaaaagggagatcaaggagacccaggccctgctggtcca
agatatgtggacaaaactccagatgataacaccctagatggagcaaaaggagcaaaagga
tacaagggtgaatatggaccaagaggaatggatggaatgaagggtgctacaggagaagtg
ggtgatttaggatcatatggtgactatggagaaaagggattgccaggttacagtggagaa
agaggttttcctggtaatcctggtattcctggccttctaggcatgaatggagaaaaagga
agagatggccctcaaggaagaccaggatatgatggctacaagggaccttctggagactat
ggaatggatggagatcccggacctgcccctgacatcgaggaaatcgtggtaggagttggc
cctcctggcgacgaaggaccacccggtaacccaggtcctagaggcttctcaggagctatt
ggactttttggtgatcaaggacagcctggttaccctggacccatgggaggtccagggcca
cgaggcccaactggatcacaaggagaaggaagagatggagagaagggagaatcaggacgt
ccaggtatacctggcttccaaggagagactggtgaacggggaaacgatgggaactttgga
gagcgaggagagaagggtaacatgggagagtctagaccaggaccccctggtatggatgga
tcaagaggacgtcagggtttcatgggccaaaaaggaggacgtggacctcccggaagagct
ggacctgctggaccagcgaggtctggtaatcagagtttccaaggatttccaggagacaca
ggtaatacaggattgaaaggaatgaggggtattcaaggagctctaggaagggatggacgt
ccaggaagcaagggtgagcttggaggtatctgccccttctgtccaccaggaatcaaaggc
taccctggagaccgaggttaccctggggatccaggttcccctggacaggatggcgctcca
ggagtcgagggactcaaaggaaacccaggagaagtaggattcattggcttggatggaaac
aatggaaaccagggtccacctggtcaacccggacccgatggtagtccaggtttgaatgga
gaaccaggacagccaggaccatacagaagaggtcagcagggtcccaaaggatatgcagga
ccgaaaggagctacaggagtacctggtgtcatgggaaccgtcaatcttaaagtgcccgtg
gggattaatctgactggtgaaacaggagatcaaggtccacggggtccagacggccgtgac
ggactccaaggaccacaagggttccaaggagaagaaggtagtcgttcatatggtccaaat
ggtgaaaggggtagaccaggagatcctggaccacctggtgaagaaggacccaagggacgt
gcaggaccacctgcgatacgtccagatgaacctaaaggattccaaccaggactttacgga
gaaccaggaccacgtgggccaattggccgtcctggcctgccaggctttgatggagagcct
ggtcctcgtggagaccctggatttgccggctttccaggaggtataggagacactggtcct
gcaggacgttcaacctttggacctaaaggattccctggtatacgaggagacaaaggtgtg
gaagggcgttttggccggaccggagagaatggcccacagggtggacctggacctgttggg
ctatatggattgaagggtgctcctggagaagctggtccagacgggtttcctggaacttct
ggtcctcaaggacttcctgggactcctggagatgccggaataaagggagagaagggtctc
ggaggaacaccaggtatctctggtttccctggttttgaaggtcagcgaggtgatcgaggc
gattatggaccagacggatttccaggtggacctggtctaagaggagagaactcccaaggc
ccccctggtcttcctggtcctcagggacctgatggcagaccaggtcgcaaaggtctgcct
ggatcattaggtgctaagggtgagcgaggtttcacaggagagtttggccttcgtggagaa
ccaggagacccaggagtcccaggagtacccggcaggaaaggattcaatggttacaatggc
agaccaggaaggggaggttctccaggctccctagggcctcgtggtgaaattggagatcca
ggaccaggtggagtgaacggaccacccggaccaccaggtatcattggagtgaggggagta
ccaggagatttaggagatctaggaccaagtggtttcccaggattccaaggaagaccagga
caaaatggaatgtttggaaaccgaggaccaaggggactttctggaggccctggtgatgca
ggttatcctggatttcaaggaatggaaggcagccgaggatttgatggaaatccaggaccg
gagggaaacattggaaaccctggtccaagtggtcgagttggagaacctggtatcccggga
gcagatggtttccctggaggtccaggtctagccggagcagatggtgaaaggggccagatg
ggtggtataggagacgtaggaccccctggacctgggggagaaccaggacctagaggagac
tttggaactccaggcataccaggaaactcaggtctagttggactgccgggcagacgagga
gaaactggtccagatggtccatcaggtgagaccggacctcttggaatcaaaggatatcca
ggcaacccaggacgaaacggtttcccaggtctgcgtggagccagaggagaaaagggagat
gatcctgaaatcagaatccccacagaggtcaatagaggcgaagctggagccccaggagat
ccaggaccaacaggactaggagggatagtcggagatgtaggtccccaaggaggaaatggt
ttccccggtcgtagaggaatacccggaatagagggtccaccaggacctgagggagaacca
ggactaccaggtctagttggattccgaggaccaattggtgaagatggacccaaaggagga
ccaggtcctaatggagagacaggtgaatccggattgaagggcttcccaggatacaacggc
atccgtggtcagaagggtaactctggacgaggaggcttcccaggattccctggtgaacca
ggcggagcgggagagataggatcccaaggtcctcgcggggcgaaaggttaccctggtctt
aaaggagaccgtggaataccagctccaataggaagcagaggagaacctggaacaccggga
acaccaggagggccaggagaaagaggttattcaggtaggcctggatttgaaggtcctaaa
ggtctacagggaatgaagggagatcttggtgagcaaggaccaccaggtcccttaccacca
gaccttggaccaggcccacaaggaatgcaaggagttccaggaataccaggcttgagaggt
tacaagggatttgttggagactttggagtaataggagtaattggagaaaaaggaacaaag
ggaaggccaggaatctttggactcaagggtgccccaggacctccaggtcagcctggattc
aatggagtgaaaggagatggaggagatcctggtcttgcccagaaaggactgaagggagaa
caaggagaacaaggatttgctgggttcccaggaaggattggtttaccaggcatcgatgga
ccgctgggacctccaggacccaaaggaagagatggtctatttggagactttggtccatct
ggtctaccagggcgcaacggagagccaggaatgccaggtttcccgggagacagtggagag
tctggatatggaggacgacctggatcacctggtcctaagggaatgggaggaaacaccggt
atccggcccaaccgagggcacttcatcacccgtcacagccagtccaggaatgtaccctcc
tgtcccgcaggcaccgtggaactgtggcgtggattcagtgttctcttctccatgggcaat
ggccatgctcaccatcaagatctaggtgatgctggctcttgcttgcaacgtttcagcacc
atgcccttcctcttctgcaacttcaacaacgtctgcaactacgccagccgcaatgaccgc
tcctactggctgaccaccaacgagccccttcccatgatgcccctgatgaaccaacagatt
gacccttacatcagtcgttgcactgtgtgtgaggctcccactcaatcccttgcgattcac
agccagtcacaggagattccacagtgtccaggagggtggaggagtctatggacagggtac
agtttcactatgtacacagcagcttctgaaggcggtggtcaaggccttgaatcggtcggc
tcctgcctggagaacttccgtgccacgcctttcatcgagtgcaatggcagaggtaactgt
cacttcttctcaaacgaatacagcttctggttaacagtcatcgacgaggaagaccagttt
gccattcccaggaaacgcactatcaaatcaggacagctacagtcggtggtcagccgctgc
agagtgtgtcaaaaagtcaactaa

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