Strongylocentrotus purpuratus (purple sea urchin): 373269
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Entry
373269 CDS
T01019
Symbol
COLP4alpha
Name
(RefSeq) alpha2(IV)-like collagen precursor
KO
K06237
collagen type IV alpha
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
373269 (COLP4alpha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spu04147
]
373269 (COLP4alpha)
00536 Glycosaminoglycan binding proteins [BR:
spu00536
]
373269 (COLP4alpha)
Exosome [BR:
spu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
373269 (COLP4alpha)
Glycosaminoglycan binding proteins [BR:
spu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
373269 (COLP4alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
373269
NCBI-ProteinID:
NP_999676
UniProt:
Q26640
LinkDB
All DBs
AA seq
1747 aa
AA seq
DB search
MLYFSSSLRSLWRWSVLVIFLLVIVQSSKAQERRCDDTCRKCNCKGRKGGRGPPGFVGNK
GTPGPPGADGEQGVPGLKGDGGFPGESGSRGPKGDLGRSGIPGFSGHKGYTGVPGPHGVQ
GTPGIPGCNGSQGVPGPQGPGLIGPPGDKGPDGFKGRPGTPGLFTPSPRGEVGEDGVPGQ
DGRPGFDGFIGNGGSKGDRGPKGRQGMGGDPGESGTPAERPTVLPRGEKGDQGDPGPAGP
RYVDKTPDDNTLDGAKGAKGYKGEYGPRGMDGMKGATGEVGDLGSYGDYGEKGLPGYSGE
RGFPGNPGIPGLLGMNGEKGRDGPQGRPGYDGYKGPSGDYGMDGDPGPAPDIEEIVVGVG
PPGDEGPPGNPGPRGFSGAIGLFGDQGQPGYPGPMGGPGPRGPTGSQGEGRDGEKGESGR
PGIPGFQGETGERGNDGNFGERGEKGNMGESRPGPPGMDGSRGRQGFMGQKGGRGPPGRA
GPAGPARSGNQSFQGFPGDTGNTGLKGMRGIQGALGRDGRPGSKGELGGICPFCPPGIKG
YPGDRGYPGDPGSPGQDGAPGVEGLKGNPGEVGFIGLDGNNGNQGPPGQPGPDGSPGLNG
EPGQPGPYRRGQQGPKGYAGPKGATGVPGVMGTVNLKVPVGINLTGETGDQGPRGPDGRD
GLQGPQGFQGEEGSRSYGPNGERGRPGDPGPPGEEGPKGRAGPPAIRPDEPKGFQPGLYG
EPGPRGPIGRPGLPGFDGEPGPRGDPGFAGFPGGIGDTGPAGRSTFGPKGFPGIRGDKGV
EGRFGRTGENGPQGGPGPVGLYGLKGAPGEAGPDGFPGTSGPQGLPGTPGDAGIKGEKGL
GGTPGISGFPGFEGQRGDRGDYGPDGFPGGPGLRGENSQGPPGLPGPQGPDGRPGRKGLP
GSLGAKGERGFTGEFGLRGEPGDPGVPGVPGRKGFNGYNGRPGRGGSPGSLGPRGEIGDP
GPGGVNGPPGPPGIIGVRGVPGDLGDLGPSGFPGFQGRPGQNGMFGNRGPRGLSGGPGDA
GYPGFQGMEGSRGFDGNPGPEGNIGNPGPSGRVGEPGIPGADGFPGGPGLAGADGERGQM
GGIGDVGPPGPGGEPGPRGDFGTPGIPGNSGLVGLPGRRGETGPDGPSGETGPLGIKGYP
GNPGRNGFPGLRGARGEKGDDPEIRIPTEVNRGEAGAPGDPGPTGLGGIVGDVGPQGGNG
FPGRRGIPGIEGPPGPEGEPGLPGLVGFRGPIGEDGPKGGPGPNGETGESGLKGFPGYNG
IRGQKGNSGRGGFPGFPGEPGGAGEIGSQGPRGAKGYPGLKGDRGIPAPIGSRGEPGTPG
TPGGPGERGYSGRPGFEGPKGLQGMKGDLGEQGPPGPLPPDLGPGPQGMQGVPGIPGLRG
YKGFVGDFGVIGVIGEKGTKGRPGIFGLKGAPGPPGQPGFNGVKGDGGDPGLAQKGLKGE
QGEQGFAGFPGRIGLPGIDGPLGPPGPKGRDGLFGDFGPSGLPGRNGEPGMPGFPGDSGE
SGYGGRPGSPGPKGMGGNTGIRPNRGHFITRHSQSRNVPSCPAGTVELWRGFSVLFSMGN
GHAHHQDLGDAGSCLQRFSTMPFLFCNFNNVCNYASRNDRSYWLTTNEPLPMMPLMNQQI
DPYISRCTVCEAPTQSLAIHSQSQEIPQCPGGWRSLWTGYSFTMYTAASEGGGQGLESVG
SCLENFRATPFIECNGRGNCHFFSNEYSFWLTVIDEEDQFAIPRKRTIKSGQLQSVVSRC
RVCQKVN
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgttatattttagttcgtcattacggagtctatggaggtggtcggtgttggtgatattt
cttctagttattgttcaatctagtaaagcacaagagagacggtgtgatgatacatgcaga
aagtgcaactgtaaaggcagaaaaggaggaaggggcccaccaggcttcgtcgggaacaag
ggaactccaggcccaccaggtgcggacggggaacaaggagttccaggtctaaagggagat
ggaggcttccctggggaatcaggttctaggggacccaaaggagatctaggtcgatcaggt
ataccaggtttttcaggccataaaggatacacaggtgtaccaggcccgcatggtgttcaa
ggtactccaggtatcccaggatgcaacgggagtcagggagtaccaggaccacaaggtcca
ggactaattggacccccaggagataaaggccctgatggtttcaaaggacgacctggcacc
ccgggtctgttcacaccatcacctagaggtgaagttggtgaagatggggtacccggacaa
gacggtcgacctggctttgatggcttcatagggaacgggggatccaaaggagatagagga
cctaaaggacgacagggcatgggtggagatccaggagaatcaggcacacctgctgaacga
cccactgttctacctaggggagaaaagggagatcaaggagacccaggccctgctggtcca
agatatgtggacaaaactccagatgataacaccctagatggagcaaaaggagcaaaagga
tacaagggtgaatatggaccaagaggaatggatggaatgaagggtgctacaggagaagtg
ggtgatttaggatcatatggtgactatggagaaaagggattgccaggttacagtggagaa
agaggttttcctggtaatcctggtattcctggccttctaggcatgaatggagaaaaagga
agagatggccctcaaggaagaccaggatatgatggctacaagggaccttctggagactat
ggaatggatggagatcccggacctgcccctgacatcgaggaaatcgtggtaggagttggc
cctcctggcgacgaaggaccacccggtaacccaggtcctagaggcttctcaggagctatt
ggactttttggtgatcaaggacagcctggttaccctggacccatgggaggtccagggcca
cgaggcccaactggatcacaaggagaaggaagagatggagagaagggagaatcaggacgt
ccaggtatacctggcttccaaggagagactggtgaacggggaaacgatgggaactttgga
gagcgaggagagaagggtaacatgggagagtctagaccaggaccccctggtatggatgga
tcaagaggacgtcagggtttcatgggccaaaaaggaggacgtggacctcccggaagagct
ggacctgctggaccagcgaggtctggtaatcagagtttccaaggatttccaggagacaca
ggtaatacaggattgaaaggaatgaggggtattcaaggagctctaggaagggatggacgt
ccaggaagcaagggtgagcttggaggtatctgccccttctgtccaccaggaatcaaaggc
taccctggagaccgaggttaccctggggatccaggttcccctggacaggatggcgctcca
ggagtcgagggactcaaaggaaacccaggagaagtaggattcattggcttggatggaaac
aatggaaaccagggtccacctggtcaacccggacccgatggtagtccaggtttgaatgga
gaaccaggacagccaggaccatacagaagaggtcagcagggtcccaaaggatatgcagga
ccgaaaggagctacaggagtacctggtgtcatgggaaccgtcaatcttaaagtgcccgtg
gggattaatctgactggtgaaacaggagatcaaggtccacggggtccagacggccgtgac
ggactccaaggaccacaagggttccaaggagaagaaggtagtcgttcatatggtccaaat
ggtgaaaggggtagaccaggagatcctggaccacctggtgaagaaggacccaagggacgt
gcaggaccacctgcgatacgtccagatgaacctaaaggattccaaccaggactttacgga
gaaccaggaccacgtgggccaattggccgtcctggcctgccaggctttgatggagagcct
ggtcctcgtggagaccctggatttgccggctttccaggaggtataggagacactggtcct
gcaggacgttcaacctttggacctaaaggattccctggtatacgaggagacaaaggtgtg
gaagggcgttttggccggaccggagagaatggcccacagggtggacctggacctgttggg
ctatatggattgaagggtgctcctggagaagctggtccagacgggtttcctggaacttct
ggtcctcaaggacttcctgggactcctggagatgccggaataaagggagagaagggtctc
ggaggaacaccaggtatctctggtttccctggttttgaaggtcagcgaggtgatcgaggc
gattatggaccagacggatttccaggtggacctggtctaagaggagagaactcccaaggc
ccccctggtcttcctggtcctcagggacctgatggcagaccaggtcgcaaaggtctgcct
ggatcattaggtgctaagggtgagcgaggtttcacaggagagtttggccttcgtggagaa
ccaggagacccaggagtcccaggagtacccggcaggaaaggattcaatggttacaatggc
agaccaggaaggggaggttctccaggctccctagggcctcgtggtgaaattggagatcca
ggaccaggtggagtgaacggaccacccggaccaccaggtatcattggagtgaggggagta
ccaggagatttaggagatctaggaccaagtggtttcccaggattccaaggaagaccagga
caaaatggaatgtttggaaaccgaggaccaaggggactttctggaggccctggtgatgca
ggttatcctggatttcaaggaatggaaggcagccgaggatttgatggaaatccaggaccg
gagggaaacattggaaaccctggtccaagtggtcgagttggagaacctggtatcccggga
gcagatggtttccctggaggtccaggtctagccggagcagatggtgaaaggggccagatg
ggtggtataggagacgtaggaccccctggacctgggggagaaccaggacctagaggagac
tttggaactccaggcataccaggaaactcaggtctagttggactgccgggcagacgagga
gaaactggtccagatggtccatcaggtgagaccggacctcttggaatcaaaggatatcca
ggcaacccaggacgaaacggtttcccaggtctgcgtggagccagaggagaaaagggagat
gatcctgaaatcagaatccccacagaggtcaatagaggcgaagctggagccccaggagat
ccaggaccaacaggactaggagggatagtcggagatgtaggtccccaaggaggaaatggt
ttccccggtcgtagaggaatacccggaatagagggtccaccaggacctgagggagaacca
ggactaccaggtctagttggattccgaggaccaattggtgaagatggacccaaaggagga
ccaggtcctaatggagagacaggtgaatccggattgaagggcttcccaggatacaacggc
atccgtggtcagaagggtaactctggacgaggaggcttcccaggattccctggtgaacca
ggcggagcgggagagataggatcccaaggtcctcgcggggcgaaaggttaccctggtctt
aaaggagaccgtggaataccagctccaataggaagcagaggagaacctggaacaccggga
acaccaggagggccaggagaaagaggttattcaggtaggcctggatttgaaggtcctaaa
ggtctacagggaatgaagggagatcttggtgagcaaggaccaccaggtcccttaccacca
gaccttggaccaggcccacaaggaatgcaaggagttccaggaataccaggcttgagaggt
tacaagggatttgttggagactttggagtaataggagtaattggagaaaaaggaacaaag
ggaaggccaggaatctttggactcaagggtgccccaggacctccaggtcagcctggattc
aatggagtgaaaggagatggaggagatcctggtcttgcccagaaaggactgaagggagaa
caaggagaacaaggatttgctgggttcccaggaaggattggtttaccaggcatcgatgga
ccgctgggacctccaggacccaaaggaagagatggtctatttggagactttggtccatct
ggtctaccagggcgcaacggagagccaggaatgccaggtttcccgggagacagtggagag
tctggatatggaggacgacctggatcacctggtcctaagggaatgggaggaaacaccggt
atccggcccaaccgagggcacttcatcacccgtcacagccagtccaggaatgtaccctcc
tgtcccgcaggcaccgtggaactgtggcgtggattcagtgttctcttctccatgggcaat
ggccatgctcaccatcaagatctaggtgatgctggctcttgcttgcaacgtttcagcacc
atgcccttcctcttctgcaacttcaacaacgtctgcaactacgccagccgcaatgaccgc
tcctactggctgaccaccaacgagccccttcccatgatgcccctgatgaaccaacagatt
gacccttacatcagtcgttgcactgtgtgtgaggctcccactcaatcccttgcgattcac
agccagtcacaggagattccacagtgtccaggagggtggaggagtctatggacagggtac
agtttcactatgtacacagcagcttctgaaggcggtggtcaaggccttgaatcggtcggc
tcctgcctggagaacttccgtgccacgcctttcatcgagtgcaatggcagaggtaactgt
cacttcttctcaaacgaatacagcttctggttaacagtcatcgacgaggaagaccagttt
gccattcccaggaaacgcactatcaaatcaggacagctacagtcggtggtcagccgctgc
agagtgtgtcaaaaagtcaactaa
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integrated database retrieval system