Strongylocentrotus purpuratus (purple sea urchin): 588842
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Entry
588842 CDS
T01019
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03420
Nucleotide excision repair
spu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
588842
09124 Replication and repair
03420 Nucleotide excision repair
588842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spu04121
]
588842
03400 DNA repair and recombination proteins [BR:
spu03400
]
588842
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
588842
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
588842
TCR (transcription coupled repair) factors
Cul4-CSA complex
588842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
588842
NCBI-ProteinID:
XP_030845179
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MAYNYVVTAHKPTAVNGCVTGNFTCADDLNLIIAKNTRLEIYVVTPEGLRPIKEIGMYGR
IEVMKLYKPPGSPKALLFVLTAKYNACILECVNENGTEEIITKAQGNVQDRIGRPSETGP
IGIIDPECRMIGLRLYDGLFKIIPLDRDNKELKAFNIRLEELNVIDVQFLYGCHQPTIVF
LHQDPHGRHVKTYEVNLREKEFNRGPWKQDNVETEATMVIAVPQPYGGALIIGQESITYH
KGDNYVAIAPPTIKNSTLVCYGRLDNNGSRYLLGDLTGRLFLLLLDKEESMDGAATVKDL
KLEFLGETSIAECLTYLDNGVVFIGSRLGDSQLVRLNTESDESGSYVTMMETFTNLGPIV
DMAVVDLDRQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGIWPLKVDMNSQ
FDDTLVLSFVGQTRVLMLNGEEVEETELQGFDGERQSFYCGNVSHNQIIQITGASVRLVS
TPTKRMVSEWRPQSGKNISVASCNSKQVVCAAGSDIFYLEIFEGEVRQVSTVTMEHEVAC
LDITPLTGDFTDLCAVGLWTDISARILKIPTMESMHVELLGGEIIPRSILLTTFEGQNYI
LCALGDGSLFYFQLNAETGYMTDRKKVILGTQPTVLKTFKSLSTVNVFACSDRPTVIYSS
NHKLVFSNVNLKEVSYMCPLNSDGYPDSLALCNDTTLMIGSIDEIQKLHIRTVPLGETPL
RITYQEPSQTFGIISTRTDVVDSSGTTASMGQTRQSASTSALNITKSGGNKGMAGQAGGS
GEGSSFGDEVEVHSLLVIDQHTFEVLHAHHFGSSEYATSLISCKLCNDPNWYYIVGLANV
HPDEAEPKSGRIVVFQYSDGKLQEIAEKEIKGAPYSLVEFNGKLLASVNSVVRLFEWTPE
HSLRVECSHYNNVLALYLKTKGDFIVVGDLMRSITLLAYKPMEGCLEEIARDYSPNWMSA
VEILDDDTFLGAENSSNLFTCQKDSAATTDEERRHLQEVGLFHLGEFVNVFRHGSLVMQN
IGESTIPTTGSVLFGTVSGSVGLVTQLNEEFYRFLLEVQNKLTKVIKSVGKIKHSFWRSF
YSERKTEPMDNFIDGDLLESFLDLSRDTMDEVAQGLQIDDGGMKRDCMANDLIKIVEELT
RIH
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaactatgtggttacggcgcacaaaccaacagctgtcaatggctgtgtcaca
ggtaacttcacttgtgctgatgacctgaacctgatcattgctaagaacacccggctagag
atctacgtagtcactcctgagggactccgaccaatcaaagagatcggcatgtacggacgc
attgaggtcatgaaactatacaaaccaccagggtcgcctaaagccttgctgtttgtgttg
acagccaagtataatgcctgtatcttagagtgtgtcaacgagaatggaacagaagaaatc
atcaccaaagcacaaggaaatgttcaggaccggattgggagaccatcagagactggacca
ataggaatcattgatccagaatgccgtatgattggtttgagactctatgacggactcttc
aaaatcatccctctagacagagataataaggaactcaaagcattcaacattaggcttgaa
gaactgaatgttatcgatgttcagtttctgtatgggtgccatcaaccaacaatcgtcttc
ttgcatcaggatccacacggtaggcatgtgaagacctacgaggtgaatctgagggagaaa
gagttcaacagaggtccatggaagcaagataacgttgagacggaagcgaccatggtgatt
gctgtaccacaaccctatgggggcgccctcatcatcggccaggaatccatcacataccac
aaaggagataactatgtagctattgcaccacccactattaagaatagcacacttgtttgt
tatggtcgccttgacaacaatggatctcgttaccttctcggcgacctgacaggtcgtctg
ttcttactcctccttgacaaggaggaaagcatggacggagcagcgaccgttaaagatctc
aagctggagttcttgggagagacatctatagctgaatgcctgacgtaccttgataatgga
gtggtcttcattggatctcgtctgggtgattcacagctggtccggttgaacacagaatca
gatgagagtggatcctatgtcactatgatggaaactttcaccaatctaggacctatcgta
gacatggctgtagtagacctagatagacaaggccagggccagttggtaacctgttcagga
gcgtacaaagagggttcacttcggatcattagaaatggaattggaatccatgaacatgcc
agcattgatctaccgggtatcaaaggtatctggccattgaaggtggatatgaactctcaa
tttgatgatacattggtactctctttcgttggtcagaccagggtgctaatgttgaatggc
gaggaagtagaagaaacagaattacagggttttgatggcgaacgtcaatcattctactgt
ggtaatgtctcacacaatcaaatcattcagatcactggtgcgtctgtgcgtctggtgagt
acacctaccaagcgcatggtgagtgagtggcgcccccaatcaggcaagaacatcagcgta
gcatcgtgtaacagcaagcaggtggtgtgtgctgcaggctcggacatcttctatcttgag
atctttgaaggagaagtaagacaagttagtaccgtgaccatggagcatgaggtagcgtgt
ttggacatcacaccgttgaccggtgacttcactgacctctgtgctgtaggtctatggacg
gacatctctgcacgtatcctcaaaatacccaccatggaatccatgcatgtggagctacta
ggaggagaaatcatccctaggtcgatcttattgacgacctttgaaggtcagaactacatc
ctgtgtgccctcggtgacggatcactcttctactttcagcttaatgcagagacaggatat
atgacggataggaagaaggtgattcttggcacccaaccaaccgtcttgaagacgtttaaa
tctctctcaacggtaaacgtgtttgcctgctcggacagaccaacggtgatctactccagc
aatcacaaactggttttctccaatgtcaatctaaaggaggtcagctacatgtgtcctctc
aattctgatggatacccagacagcttggctctatgcaatgacaccactctgatgatcgga
agcatcgatgagattcagaagcttcacatccgcaccgtgcctctgggagagacgccgctg
cgcatcacgtatcaggaaccttcacagaccttcgggatcatctcaacgaggaccgatgtg
gtggactcctcgggtacaacggcctccatgggccagaccagacagagcgctagcaccagt
gctcttaacatcacaaagagtggaggaaacaaagggatggcaggccaagctggaggcagt
ggggaaggttcctcattcggagatgaagtggaagtccactcactgctcgtcatagaccaa
catacttttgaagtgctccacgctcatcactttggttcatctgaatatgcaacaagtctg
atctcatgtaagctgtgtaatgatcccaactggtactacattgttggtctcgctaacgtt
catccggatgaagccgagccgaaaagtggaaggattgtcgtcttccagtacagtgatggt
aaactgcaagagattgcagaaaaggagatcaaaggtgcaccatactcactggtagagttt
aatggtaaactccttgcttcagtcaacagtgtggttcgtttgtttgagtggacccccgag
cattcactacgggttgaatgcagtcattacaacaatgtactagctctgtatctcaagact
aaaggagatttcattgtcgttggcgatttgatgcgttctattacgttacttgcttacaaa
cctatggaaggatgcctagaagagatcgctagagactatagccctaattggatgtcagct
gtagagatcttggatgatgatacattcttgggagctgaaaactcttcaaacctcttcaca
tgtcagaaagacagtgcggcaacaacagatgaagaaagacgacacctacaggaggttggt
ctgtttcatcttggggagtttgtcaacgtgttccgccatggatcgctagtgatgcagaac
atcggagagagtacaatacctacaaccggcagtgtactctttggtaccgtcagtggctca
gtaggtctagtgactcagctgaacgaggagttttacagatttcttcttgaagtacagaac
aaactcaccaaggtcatcaagagcgtgggaaagatcaaacacagcttctggaggtcgttc
tactcggagaggaagacagagccgatggataacttcatcgatggtgatctcttagaaagc
ttcttagatctcagtagagacacaatggatgaggtagcccagggattgcagatcgatgat
ggagggatgaagagagactgcatggctaatgatctcatcaagattgttgaagaacttacc
aggattcactga
DBGET
integrated database retrieval system
