Streptococcus pyogenes A20 (serotype M1): A20_1720c
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Entry
A20_1720c CDS
T02335
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
spya
Streptococcus pyogenes A20 (serotype M1)
Pathway
spya03030
DNA replication
spya03430
Mismatch repair
spya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A20_1720c (polC)
03430 Mismatch repair
A20_1720c (polC)
03440 Homologous recombination
A20_1720c (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spya03032
]
A20_1720c (polC)
03400 DNA repair and recombination proteins [BR:
spya03400
]
A20_1720c (polC)
Enzymes [BR:
spya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A20_1720c (polC)
DNA replication proteins [BR:
spya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A20_1720c (polC)
DNA repair and recombination proteins [BR:
spya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A20_1720c (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
DEDDh_C
HHH_3
Zn-ribbon_8
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFV38781
LinkDB
All DBs
Position
complement(1625476..1629873)
Genome browser
AA seq
1465 aa
AA seq
DB search
MSDLFAKLMDQIEMPLDMRRSSAFSSADIIEVKVHSVSRLWEFHFAFAAVLPIATYRELH
DRLIRTFEAADIKVTFDIQAAQVDYSDDLLQAYYQEAFEHAPCNSASFKSSFSKLKVTYE
DDKLIIAAPGFVNNDHFRNNHLPNLVKQLEAFGFGTLTIDMVSDQEMTEHLTKNFVSSRQ
ALVKKAVQDNLEAQKSLEAMMPPVEEATPAPKFDYKERAAKRQAGFEKATITPMIEIETE
ENRIVFEGMVFDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAWL
RVQGNIETNPFTKSLTMNVQQVKEIVRHERKDLMPEGQKRVELHAHTNMSTMDALPTVES
LIDTAAKWGHKAIAITDHANVQSFPHGYHRARKAGIKAIFGLEANIVEDKVPISYEPVDM
DLHEATYVVFDVETTGLSAMNNDLIQIAASKMFKGNIVEQFDEFIDPGHPLSAFTTELTG
ITDKHLQGAKPLVTVLKAFQDFCKDSILVAHNASFDVGFMNANYERHDLPKITQPVIDTL
EFARNLYPEYKRHGLGPLTKRFQVSLDHHHMANYDAEATGRLLFIFLKDAREKHGIKNLL
QLNTDLVAEDSYKKARIKHATIYVQNQVGLKNMFKLVSLSNIKYFEGVPRIPRTVLDAHR
EGLLLGTACSDGEVFDAVLTKGIDAAVDLARYYDFIEIMPPAIYQPLVVRELIKDQAGIE
QVIRDLIEVGKRAKKPVLATGNVHYLEPEEEIYREIIVRSLGQGAMINRTIGRGEGAQPA
PLPKAHFRTTNEMLDEFAFLGKDLAYQVVVQNTQDFADRIEEVEVVKGDLYTPYIDKAEE
TVAELTYQKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVG
SRGSVGSSFVATMIGITEVNPMPPHYVCPSCQHSEFITDGSVGSGYDLPNKPCPKCGTPY
QKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGDEYAFRAGTVGTVAEK
TAYGFVKGYERDYGKFYRDAEVDRLAAGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQY
PADDVTASWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPITIPADDPGVMA
LFSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVW
LGNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEEERN
GYIDAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHHPIMYYCAYFSIR
AKAFELKTMSGGLDAVKARMEDITIKRKNNEATNVENDLFTTLEIVNEMLERGFKFGKLD
LYKSDAIEFQIKGDTLIPPFIALEGLGENVAKQIVKARQEGEFLSKMELRKRGGASSTLV
EKMDEMGILGNMPEDNQLSLFDDFF
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttattcgctaaattgatggaccagatagaaatgccacttgacatgagacgt
tcaagtgccttttcatctgctgatattatcgaggtaaaggtacattcggtgtcacgcttg
tgggaatttcattttgcctttgcagcggttttaccgattgcaacttatcgtgaattgcat
gatcgtttgataagaacttttgaggcggctgacattaaggtaacctttgacatccaagct
gctcaggtggattattcagatgatctgcttcaagcttattaccaagaagcttttgagcat
gcaccgtgtaatagtgctagttttaaatcttctttctcaaagctcaaagtgacttatgag
gatgacaaactcattattgcagcgccaggttttgtgaataacgatcattttagaaacaat
catctgcctaatctggtcaagcaattagaagcctttggctttggcaccttgaccatagat
atggtgtcagatcaggaaatgactgagcatttgaccaagaattttgtttccagtcgtcag
gctcttgtgaaaaaggctgtgcaggataatttggaagcccaaaaatctcttgaagccatg
atgccaccagttgaggaagccacacctgctcctaagtttgactacaaggaacgagcagct
aagcgtcaggcagggtttgaaaaagcaaccatcacaccaatgattgagattgagaccgaa
gaaaaccggattgtctttgagggtatggtttttgacgtggagcgtaaaacgactaggaca
ggtcgccatatcatcaactttaaaatgacagactatacctcctcgtttgctctccaaaaa
tgggctaaagacgatgaggagctccgtaaatttgatatgattgctaagggagcttggtta
cgggtacaagggaatattgagaccaatccttttacgaagagtctcaccatgaatgtccag
caggtcaaagaaattgtccgtcatgagcgcaaagacctgatgccagaagggcaaaagcgg
gtcgaacttcatgcccacaccaatatgtctaccatggatgccttaccgacagtagaaagc
ttgattgatacggcagccaagtggggacacaaggcgattgctatcaccgaccatgctaat
gtgcaaagttttcctcatggctaccatagggctcgcaaagctgggattaaggctattttt
ggcctagaagccaatattgttgaggacaaggtgcctatttcttatgaacctgttgatatg
gatttgcacgaagctacctatgtggtctttgacgtggaaaccacaggtctatctgctatg
aataatgacctgattcagattgcggcttccaaaatgtttaaaggaaatattgtagagcag
tttgatgaattcattgatcctgggcatcctctttcagcctttaccaccgaattgacagga
attaccgataagcatttgcagggcgccaagccattggttactgtcctaaaagcttttcag
gacttttgcaaagatagtatcttggttgcccacaacgccagttttgacgtgggctttatg
aacgccaattatgaacgccacgacttgcccaaaatcacacagcctgtgattgatacctta
gaatttgctagaaacttgtatcctgagtacaagcgtcacggtttgggaccgctcaccaag
cgtttccaagtgagtctagaccaccatcatatggccaattacgacgcggaagccacagga
cgtcttttgtttatttttctaaaagatgccagagaaaagcatggcatcaaaaatcttttg
caactcaatacagatttggtggctgaggattcttacaaaaaagcgcggattaagcatgcg
actatctatgtgcaaaatcaggttggtcttaaaaatatgtttaagttggtcagcctttcc
aatatcaaatattttgaaggggtgccgcgtattccaagaaccgtcttagatgctcacaga
gagggtttgttacttggtacagcttgttctgacggcgaggtttttgatgccgttctgact
aaaggaattgatgcagcggttgatttggctaggtattatgattttatcgaaatcatgcca
ccagccatttaccagccattggttgtccgtgaattaatcaaagatcaagcaggtattgag
caggtgattcgtgacctcattgaagtagggaaacgagctaagaaacctgtgcttgccact
gggaatgtgcattatctagagcctgaagaagagatttaccgtgaaattattgtgcgtagt
cttggtcagggtgccatgattaatagaacaatcggccgtggggaaggggcacagcctgct
cctctacctaaagcgcactttagaacaaccaatgaaatgctggatgagtttgcctttctt
ggaaaagacctcgcttatcaagtagttgtgcaaaatactcaggattttgcggaccgtatt
gaggaagtggaagtggttaagggcgatctttacaccccgtatattgataaggccgaagag
acggttgccgaattaacctatcaaaaagcctttgaaatttatggtaatcctctcccagat
attattgatttacgcattgaaaaagagttaacctctatcttggggaacggttttgctgtg
atttatctcgcttcccaaatgcttgttaaccggtcaaatgagcgaggctacctagttggt
tctaggggatctgtagggtctagctttgtcgccaccatgattgggattactgaggttaat
cctatgccgcctcactacgtttgcccgtcctgccaacattctgaatttatcacagatggg
tcagttggatctggctatgatttgcctaataaaccctgtccgaaatgtggcaccccttat
caaaaagatgggcaagacattccctttgagacctttcttgggtttgatggggataaggtg
cccgatattgatttgaacttctctggtgatgaccagcccagtgcccatttggatgtccga
gatatttttggtgacgaatacgcctttcgtgctggaacagttggtaccgtagcagaaaaa
acagcttatggatttgtcaaaggctatgaacgcgactatggcaagttctatcgtgatgct
gaggtggatcgtctagcagcaggtgctgctggtgtgaaacgaacgactgggcagcaccct
ggggggattgttgttattcctaattacatggatgtttatgattttacccccgtgcaatat
ccagccgatgatgtaacggcttcttggcagacaactcactttaacttccatgatattgat
gaaaacgtcttgaaacttgatatcctagggcatgatgatccgaccatgattcgtaaactt
caggatttatcgggcattgatcctattactattcctgctgatgatccgggagttatggct
ctcttttctgggacagaggttttgggcgttaccccggaacaaattgggacaccgactggt
atgctaggcattccagaatttggaaccaactttgttcgcggcatggttaatgagacgcat
ccgaccacttttgcggagcttttgcagttgtctggactatctcatggaaccgatgtttgg
cttggtaatgcacaagatttgattaaagaaggcattgcaaccctaaaaaccgttatcggt
tgtcgtgacgacatcatggtttacctcatgcacgcaggcttagaaccaaaaatggccttt
accattatggagcgtgtgcgtaagggattatggctaaaaatttctgaggaagaacgtaat
ggctatattgatgccatgcgagaaaacaatgtgcccgactggtacattgaatcgtgtgga
aaaatcaagtacatgttccctaaagcccatgcggcagcttatgttttgatggcccttcgg
gtggcttatttcaaggtgcaccaccccattatgtattattgtgcttatttctctattcgt
gcgaaggcttttgaattaaaaaccatgagtggtggtttagatgctgttaaagcaagaatg
gaagatattactataaaacgtaaaaataatgaagccaccaatgtggaaaatgacctcttt
acaaccttggagattgtcaacgaaatgttagaacgcggctttaagtttggcaaattagac
ctttacaaaagtgatgctatagaattccaaatcaaaggagatacccttatccctccattt
atagcgctagaaggtctgggtgaaaacgtggccaagcaaatcgttaaagctcgtcaagaa
ggcgaattcctctctaaaatggaattgcgtaaacgaggcggggcatcgtcaacgctcgtt
gagaaaatggatgagatgggtattttaggaaatatgccagaagataatcaattaagtctt
tttgatgactttttctag
DBGET
integrated database retrieval system
