Salpingoeca rosetta: PTSG_12838
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Entry
PTSG_12838 CDS
T04136
Name
(RefSeq) uncharacterized protein
Organism
sre
Salpingoeca rosetta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
Roc
COR
TIR_2
Ras
RsgA_GTPase
DUF4062
AAA_16
Septin
AAA_22
AAA_24
AAA_33
Motif
Other DBs
NCBI-GeneID:
16070445
NCBI-ProteinID:
XP_004989891
UniProt:
F2UM66
LinkDB
All DBs
Position
Unknown
AA seq
1348 aa
AA seq
DB search
MTSPLSSSSSAVHGELSSHSEQSRPVAKKKRIFISLRFGEAHEAAKELKQALHEACHDVD
VFLCDVPPGDDISEEIITALTDCDLAVIMGTKTYGKKTASKFSTFEELRFIINEEKPYFL
IKMCDEFQVKQTRFRLPADISYFLWNPDCGTPAHGTATTPRRLAPPAELVPQILKKLGAV
TGAGDAGTAVSPRRAPPRLDAELTPWLDKYRLLGTVGYVLERLGITNLKALEQATQALRN
TRQRAVLRRDAEAAAGKRKHKHKHKQRGKGARAASHAMATASNGGRQGEPASTQLIEDML
RREKYDANNKLPPAVVARFLRACRARTWRGITKRAQKAGKAGKAARAKAAGAEGEEGGGE
GDGDTDGGNVGVYGVDSTAEDGVLREDDAAALAMVDGDEQQGDPANGEHSDSPKAVHEHV
ASKPAGVADERVFLECFERIKDEAACKQIILSIWNNTSDEEEAFVDDFTLDMARALGEAL
KGNTTVKDLDLSTIEIDGEQARAIAAALPFNTTLETLNMEGNEIGPDAAVAIADALKRNT
SIVELDLEDNGIGPRGLKAISEALQENTTLQILLLGENDLLGVPEDAESDSEADISGVKA
LADALRVNRTLLCLSLRDNVMTSEAWRLICNTLAINQGLAEIDLSEIEITDTEARQLLRA
LRVNRRIIELDVDMDEVSDGLDDRIMTVVERNEERQEALGSLLKLGSVPLSTAKVFVCGH
QGIGKTTLINTLQASPSFFATLFRRRRKVLDEPDHPEQRTPGIEMHDFALRRKRSSASVV
LTASTSSCAPDDPNASADWLHAGTDSDRDNDSDEDEGDDDDENGGGSRASTSSKSAPRCK
LRVYDFAGQTEYHVVHELLFADHNAVFVVCVDLSKDKATVEESVLYWLRFIKTRLAQAVH
RSQHPPHVFVVGTKADKVHEQNALASTPAATATNSAVSPPPQLFPAGDGLLHSSRLREWF
GDAMRVHPFLVPLRCHDARDAGTQHLRDLLHAAWVEVTQQEVRVPKVVELIARGIRVCRR
QDEGPWPVAKLFAAIKERVADLRETLEFDESVLRKTLRYLHVRGDVLWFHAVPSLADQIF
VSPPWLLRQVVGPSLAPERFPQHLHTTNGRVTFSEFESKLGRIMPADTVVDVLASMLLCF
EEDQAVHNSSERHFVLPSRLQWDPDRLWNPADASMDVYAGRGLVVPRESGMVFPPGVFPR
IQSRMVHCFGAGTSVWQNGFITLFAPVELYGRIIGDERIDLWVRCPSKFKEDAWLALDMM
LAEVEEEVQGIDYDHLVLSYVHLSCLHPFPAGYALADVEDAALAGETHISTMLPNTSPAH
TTSPGTLTDELDNLLREDLFLKPLALVQ
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccctctcagttcttcttcctccgccgtccacggcgaactttcatctcactcg
gagcaaagccgaccggtcgcgaagaagaagcgcatcttcatctcactccggtttggcgag
gcgcacgaagcggcaaaggaactcaagcaggcgctgcacgaagcgtgccatgatgtggac
gtcttcctgtgtgatgtgccgcctggcgacgacatctcggaggagatcatcacagcactg
acagactgtgacctggctgtcatcatgggcacaaagacctacggaaagaagacggcctcc
aagttcagcaccttcgaggagctcaggttcatcatcaacgaggagaagccctacttcctc
atcaagatgtgtgacgagttccaggtcaagcaaacacgcttccgcctccccgccgacatc
tcctacttcctctggaaccctgattgtggcacaccggcgcatggcaccgccacgacacct
cgccgcttggcaccacccgcagagcttgtgccgcagatcctgaagaagttgggcgctgtc
actggtgccggggacgcgggcacagcggtgtcccctcgccgtgcgccgccgcgattggac
gccgagctcaccccgtggctcgataagtataggctgctgggcaccgtcggatacgttctt
gagcgcctgggcatcacaaacctgaaggcccttgagcaggccacgcaagctctgcgcaac
acgcgccagcgtgcggtcctccgccgtgatgccgaggcagccgctggcaagcgcaagcac
aagcacaagcacaagcaacgtggcaagggggccagggccgcgtcccatgcaatggcaaca
gcatcgaacggaggccgccagggtgaacccgcatccacgcagctgatcgaggacatgctg
aggcgcgagaagtacgacgcgaacaacaagttgcccccagctgtggtcgcgcgatttctg
cgagcgtgtcgagcacgcacgtggcgcgggatcacgaagcgcgcgcaaaaggcaggcaaa
gcaggcaaggcggcgagagcaaaggcagccggtgctgagggcgaggagggtggaggggaa
ggcgatggtgacacggacggcggtaatgttggagtttatggtgtggacagcacggcagag
gatggcgtcctcagggaggacgatgctgctgctctggccatggtggatggcgatgagcag
cagggggacccagcaaacggagagcacagcgacagccccaaggcggtgcatgagcatgtt
gcatcgaagccggcgggggttgctgacgagcgcgtgtttctcgagtgttttgagcggatc
aaggacgaggccgcgtgtaagcagatcatcctatcaatctggaacaacaccagcgacgaa
gaggaagcctttgttgacgacttcacacttgacatggcgcgtgcgcttggcgaggcgttg
aagggcaacacgaccgttaaggatctcgatctcagcaccattgaaattgacggcgaacaa
gcacgggcgattgcggctgcgcttccgttcaacaccacactcgaaaccctcaatatggaa
ggaaacgagatcgggccagatgccgcagtcgccattgccgacgctctcaagcgaaatact
tccatcgttgaattggatttggaagacaacggaataggaccgcgcggcctgaaggccata
agcgaagcgctccaggagaacacaacgcttcaaatcctcctgttgggcgaaaacgatctc
cttggtgtgccggaagacgcagagtcggattcggaggccgacatctctggtgtgaaggcg
ctggctgatgcgctcagggtcaatcgaacgctcctctgtctgagtcttcgggacaacgtc
atgacatctgaagcttggcgcctcatctgtaacacgcttgccatcaaccaaggcctggca
gaaatcgacctctctgaaattgagatcaccgacacggaagcgcgccagctcctgcgcgct
cttcgcgtcaaccgccgcatcatcgagctcgacgttgacatggacgaagtgtcagacggg
ttggacgatcgcatcatgaccgtcgtcgagcgcaacgaagagcggcaggaggcgctgggg
agtctgctcaagctcggctccgtgccgctgtccacggccaaggtgttcgtgtgcggacat
caaggcatcggcaagacgacactcatcaacacgctgcaggcgtcgccgtcattttttgcg
acgctgttccggcgccggcgcaaggtgctggacgaaccagaccacccggagcagcgcacg
ccggggattgagatgcacgactttgcgctgcggcggaagcggtcgtctgcgagcgttgtg
ctcacggcatccacgtcatcgtgtgcgcccgatgacccaaacgccagcgcagactggctg
cacgctggcacggacagcgacagagataacgacagtgatgaggacgagggcgatgacgat
gatgagaacggtggcggcagtcgtgcctcgacctccagcaagagcgcaccccgctgcaag
ctgcgcgtgtatgactttgccgggcagacggagtaccacgtggtgcacgagctgctgttt
gcggaccacaacgccgtctttgtcgtgtgcgtggacctgtccaaggacaaggccaccgtg
gaggagtctgtgctgtattggctccgcttcatcaaaacgcgcctcgcacaggccgttcac
cgttcgcagcacccaccccacgtcttcgttgtcggcacgaaggcagacaaggtgcacgag
cagaacgctcttgcatccacgcccgccgctaccgccaccaacagcgccgtgtccccgccg
ccgcagctgttcccggccggcgacgggctgctgcacagctcgcggctgcgggagtggttt
ggcgacgccatgcgcgtgcacccgttcctggtgccgctccgctgccacgacgcacgggac
gccggcacccagcacctgcgggacctgctgcacgcggcgtgggtggaggtgacgcagcag
gaggtgagggtgccaaaggtggtggagctgattgcacgtggcatccgcgtgtgccggcgg
caggacgaagggccgtggccggtcgccaaattattcgctgccatcaaggagcgcgttgcc
gatcttcgcgaaacgctcgagtttgacgagtccgtcctgcgcaaaacactccggtacttg
catgtgcgcggtgatgtgctgtggtttcacgcggttccatcgcttgccgaccagatcttc
gtgtcgcctccgtggctgctgcgtcaggtcgttggtccatcgctcgcgccggagcggttc
ccacagcatctgcacacaaccaacggccgcgtcaccttcagcgagtttgagtccaagctc
gggcgcatcatgcccgcggacaccgtggtggatgtgcttgcaagcatgctgttgtgcttt
gaggaagaccaggccgttcacaacagcagcgagcgccactttgtgctgccgtcgcggctg
cagtgggaccctgatcgcctgtggaatcctgcagacgccagcatggacgtgtacgcgggc
cgcggcctcgtcgtgccccgagagtctggcatggtgttccctccgggcgttttcccgcgc
attcaatcgcgcatggtgcattgcttcggcgccggcaccagcgtgtggcagaacggcttc
atcacgctgtttgcccccgtcgagctttacgggcgcatcatcggcgatgagcgcatcgat
ctctgggtgcgctgcccaagcaagttcaaggaggacgcctggcttgctctcgacatgatg
ttggctgaggtggaggaagaggtgcaagggattgactatgaccatctcgtcctgagctac
gtccacctctcgtgcctccacccgttccctgccggatacgcgcttgcagacgtggaggat
gcagcactcgctggtgagacgcacatctccacaatgctgcccaatacgtcgccagcgcac
accacatcaccgggcacgctgacggacgagctggacaacttgttgcgtgaggacctgttc
ttgaagccgcttgcgttggtgcaatga
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