Stenotrophomonas rhizophila: BAY15_1834
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Entry
BAY15_1834 CDS
T04500
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
srh
Stenotrophomonas rhizophila
Pathway
srh02020
Two-component system
srh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
srh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BAY15_1834
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BAY15_1834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srh03021
]
BAY15_1834
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
srh02035
]
BAY15_1834
Transcription machinery [BR:
srh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAY15_1834
Bacterial motility proteins [BR:
srh02035
]
Flagellar system
Flagellar assembly proteins
Stator
BAY15_1834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
UPF0147
Motif
Other DBs
NCBI-ProteinID:
AOA72268
UniProt:
A0A1B2N3V5
LinkDB
All DBs
Position
complement(2083186..2083932)
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AA seq
248 aa
AA seq
DB search
MKGAAQYKEVQRAAANECIAQHSDLVRRIAHHLAARLPASVEVDDLIQAGMMGLIEASRS
YDADQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAASTIRRLEQTTGRAASAT
EVAAAMDMPLPDYLRLMEDAARGQVLSLESRIEDQGELDTVAQGGPTPQQVLERGEFGRE
LGNAIGLLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVLRLRGRLKIFEA
ADAGLENT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgccgcacaatacaaagaggtgcagcgcgccgctgccaacgagtgcattgcc
cagcactcggacctggtccggcgcatcgcccaccacctggccgcacgcctgccggccagc
gttgaagtcgacgacctgatccaggccggcatgatgggcctgatcgaggcctcgcgcagc
tacgacgccgaccagggcgcctcgttcgaaacctacgcctcgatccgcatccgcggctcg
atgatcgacgagatccgccgcggcgactgggtgccgcgttcggtgcaccgccgtgcccgc
gacgccgcgtccaccatccgccggctggagcagaccaccggccgcgccgccagcgccacc
gaagtggccgccgcgatggacatgccgctgcccgactacctgcgcctgatggaagacgcc
gcgcgtggccaggtgctgagcctggaatcgcggatcgaagaccagggcgagctggatacc
gtcgcccagggcggcccgactccgcagcaggtgctggagcgcggcgaattcggccgcgag
ctgggcaatgcgatcggcctgctgcccgaacgcgaacagctggtgctgtcgctgtactac
gagcaggaactgaacctgaaagagatcggcgcggtgctcggcgtcagcgagtcgcgcgtc
tgccagatccatggccaggcagtgctgcgcctgcgtggccgactgaagatcttcgaggcg
gccgacgccggcctcgagaacacttga
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