Serratia plymuthica 4Rx13: SOD_c20130
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Entry
SOD_c20130 CDS
T02710
Symbol
ydhO
Name
(GenBank) putative endopeptidase YdhO
KO
K19303
murein DD-endopeptidase [EC:3.4.-.-]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srl01002
]
SOD_c20130 (ydhO)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
SOD_c20130 (ydhO)
Peptidases and inhibitors [BR:
srl01002
]
Cysteine peptidases
Family C40
SOD_c20130 (ydhO)
Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
SOD_c20130 (ydhO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
Peptidase_C92
DUF1175
Amidase_5
Motif
Other DBs
NCBI-ProteinID:
AGO54987
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Position
complement(2189250..2190068)
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AA seq
272 aa
AA seq
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MRLILTLFVLLFTQLFLNLAHAAPQARIAAEQRKSHVNEARPDDRKKKKAAKASKKVKVT
APPKTAKVSKAKTEKTAKKIVSAKSKHQTQKIAKIKVTPPKKGYKKGYGRHREPGMATAK
LARDEKPLKLSPAHKKRYQHAKQTAMAKLMDQMGKPYRWGGTSPRTGFDCSGLIYYAYKD
VVKIKMPRTANEMYHLRDAAPIKKNELESGDLVFFRINNRGVADHVGVYLGNGKFIQSPR
TGEEIRISQLDNDYWQNHYIGARRVVTPKTIR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaattcttacgctttttgtgctgttgtttacacagctattcttaaatctggcg
cacgctgcgccacaggcgcgtattgccgccgagcagcgcaagagccacgttaatgaagcc
cggccggatgaccgcaagaaaaagaaagcggcaaaggccagcaaaaaagtgaaagtcact
gctccgccaaaaacagccaaggtttccaaagccaaaacagaaaaaaccgctaaaaagatc
gtcagcgcaaaatcgaaacaccaaacccagaaaatagccaaaatcaaagtgaccccgccg
aaaaagggttacaaaaaaggctatggccgtcaccgggaacccggcatggccaccgccaaa
ttggctcgcgacgaaaagccgctgaaactcagcccggcgcacaaaaagcgctatcagcac
gccaagcaaaccgcgatggccaagctgatggatcaaatgggcaaaccttatcgctggggc
ggcacttcgccaagaaccggttttgactgtagcggactgatttattacgcctataaagac
gtagtgaaaatcaagatgccgcgtactgccaacgagatgtatcacctgcgcgacgcggcg
ccgatcaagaaaaacgagctggaaagcggtgacctggtgttcttccgcatcaacaaccgt
ggcgtggccgatcacgtcggcgtctatctgggcaacggcaaattcattcagtcaccgcgt
accggtgaggaaatccgtatcagccagttggacaacgactactggcaaaaccactacatt
ggcgcccgccgtgtggtaacaccgaaaaccattcgataa
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