Serratia plymuthica 4Rx13: SOD_c25800
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Entry
SOD_c25800 CDS
T02710
Symbol
oppD
Name
(GenBank) oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOD_c25800 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c25800 (oppD)
Transporters [BR:
srl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SOD_c25800 (oppD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
Mg_chelatase
AAA_22
SMC_N
ATP-synt_ab
DUF87
AAA_16
AIG1
Motif
Other DBs
NCBI-ProteinID:
AGO55553
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All DBs
Position
2897554..2898363
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AA seq
269 aa
AA seq
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MENQSPPLLTVEQLTLSINGEVKISDLNFTLHAGERLCLLGASGSGKSLTAAAILGTLPN
GAELSGSIRLLGREISGQRLQQRKSLSLAAIFQDPFTSLNPLTTVGKQLIMALRGRSGMS
KEHAQRCATELLAALGLPPESIMMRYPGQLSGGQCQRICAALALSGEKSLLIADEPTTAL
DMVSQHQLIDILKRYTERPAAPGLLFITHDLAVAASLCQRAIVLVNGTIAEHGSVAQLLR
HPVHPYTQRLVATVLRPAFDHDSSMSMAG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccaaagcccgccgttactcaccgtagaacagttgacgctgtcgattaacggg
gaagtcaaaatcagcgatctgaacttcaccctacatgccggcgaacggctatgcctgctg
ggcgcatcaggctcaggcaaatcactcaccgccgctgccattttaggcacgctgccgaac
ggtgccgaactcagcggatcgatacggctattggggcgagaaatcagcggccaacgttta
caacagcgcaagtcactctcgctggcggccatttttcaagatccttttaccagcctcaat
cccctgaccaccgtgggtaagcaattgatcatggctctgcgtggccggagcggcatgagc
aaagaacacgcccaacgctgcgccacagaactcttggctgcgctgggcctgccgccggag
agcatcatgatgcgctaccccgggcaattgtccggcggccaatgtcagcggatttgtgcg
gctctcgcgctgagcggcgagaaaagcctgctgatagcggatgaacctaccaccgcactg
gacatggtcagccagcatcagttaatcgatatcctgaagcgctacaccgagcgccccgcc
gcgcccgggctgctgtttatcacccacgaccttgccgtcgccgccagcctgtgccaacgg
gccatcgtgctggtgaatggcacgatagccgagcacggctctgtcgcgcagctgttgcgc
caccctgtacatccctacactcagcggctggttgccacggtactgcgcccggcattcgat
catgactcctctatgagtatggcgggataa
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