Salinibacter ruber M8: SRM_02063
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Entry
SRM_02063 CDS
T01209
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SRM_02063 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srm01007
]
SRM_02063 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srm03016
]
SRM_02063 (serS)
Enzymes [BR:
srm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SRM_02063 (serS)
Amino acid related enzymes [BR:
srm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SRM_02063 (serS)
Transfer RNA biogenesis [BR:
srm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SRM_02063 (serS)
Prokaryotic type
SRM_02063 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FapA
ERM_helical
CENP-F_leu_zip
Phage_GP20
Snapin_Pallidin
Hydrolase
CoA_transf_3
LUC7
CHASE3
Motif
Other DBs
NCBI-ProteinID:
CBH24984
UniProt:
D5HAC9
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All DBs
Position
2368476..2369762
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AA seq
428 aa
AA seq
DB search
MLDLDTVRNDPRRVKEALRAKGIGSPDLVDTLLKVDETRRSAITELQDVQSRQNELSQQI
GALKREGKDEEAEAIIEKTGRMKEKINRLKEEVQEAEARQEELVLELPNIPHPSVPVGAD
EDDNEVEETIGEPPAFDFNPAPHWELADRHNLVDLERGAKVAGSGFPFYLGKGARLQRAL
LNFFLDRARERGYTEMQAPLFVNPESAKGTGQLPDKDALMYEIPRDDFYPIPTAEVPVTN
FHRDEILAADDLPRRYCTYSPCWRREAGSYGSDVRGLNRLHQFDKVELVRIVPPDESYRA
LDALLEDAESALDALDLPYRRLLMCTGDMGFTQAKVYDLEVWSAAQERWLEVSSVSNFEA
FQARRAQIRYRPEPEAKPELVHTLNGSGLAFPRIVAALLENNQQPDGSIELPEALHPYTG
FARIGAEA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacctcgacaccgtccgcaacgatccccgccgcgtcaaggaagccctccgggcc
aaaggcatcggctcgcccgacctcgtcgacacgctcctcaaggtcgacgagacgcgccgg
tctgccatcacggagctgcaagacgtgcagtctcgtcagaacgagctctcgcagcaaatc
ggggccttgaagcgagagggcaaggacgaggaggcggaggcgattatcgaaaagaccggc
cggatgaaggagaagatcaatcgcctgaaggaggaggtgcaggaggcggaggcccggcag
gaggagctcgtgctggagctccccaacattccgcacccgagcgttccggtcggggcggac
gaggacgacaatgaggtcgaggagacgatcggcgaaccgcccgcgttcgacttcaacccg
gcgccgcactgggagctggccgaccggcataatctcgtggacctggagcggggcgccaag
gtggcgggaagcgggttcccgttttacctcggcaagggggctcggctccagcgggccctc
ctcaacttcttcctggaccgcgcccgggagcgcggatacaccgaaatgcaggcccccctc
ttcgtcaacccggagagcgcaaagggcaccggtcagcttccggacaaggacgccctgatg
tacgagattccgcgcgacgacttttaccccatccccaccgccgaggtgcccgtcaccaac
tttcaccgggacgagatcctcgcggccgacgacctgccccgtcggtactgcacctactcg
ccctgctggcggcgcgaggccggcagctacggctcggacgtgcgcggcctcaaccgcctg
caccagttcgacaaggtcgagctcgtgcggatcgtgccccccgacgagagctaccgcgcg
ctcgacgcgcttctggaggacgccgaaagcgccctcgatgccctcgaccttccctaccgc
cgcctcctcatgtgcaccggcgacatgggcttcacgcaggccaaggtgtacgacctggag
gtgtggagcgcggcgcaagaacgctggctggaagtgtcctccgtctccaacttcgaggcc
tttcaggcccgccgcgcacagatccgctaccggcccgagccggaggccaagcccgaactc
gtccacaccctcaacggaagcggcctcgcctttccccgcatcgtggcggccctcctcgaa
aacaaccagcagcccgacggctccatcgaactgccggaggcgctccacccctacaccggg
tttgcccgaatcggggcagaagcgtga
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