KEGG   Streptomyces rubrolavendulae: A4G23_03928Help
Entry
A4G23_03928       CDS       T04616                                 

Definition
(GenBank) Putative DNA ligase-like protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
srn  Streptomyces rubrolavendulae
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:srn00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    A4G23_03928
Enzymes [BR:srn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A4G23_03928
DNA repair and recombination proteins [BR:srn03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A4G23_03928
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(4531781..4532767)
Genome map
AA seq 328 aa AA seqDB search
MTPITEVEGRRLALSNLDKVIHPATSTTKGEILHYYATVAEALLPHLRDRPLSFLRYPDG
PDGQLFFTKNPPPGTPDWVRTAPVPRSEDPRARQVVVDGLASLMWAANLVVEFHTPQWRA
AAPAVADRLVLDLDPGPPATVVECCRVALWLRERLAEDGLTAYAKTSGAKGLHLYVPVEP
TPSEEVSAYARGLAVEAEAEHPKHVVHRMAKALRPGKVFVDHSQNAAAKTTAAPYTLRAR
RLPAVSTPVTWEEVEGCRDPGQLMFLLGDLGPRLGRYGDLLAPLAADEGAGPVPGASGGG
GSGRPGAPGRPGTSGAGGPGRPEPGGRS
NT seq 987 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgatcacggaggtggaggggcggcgcctcgcgctcagcaacctggacaaggtc
atccacccggccaccagcaccaccaagggcgagatcctgcactactacgcgaccgtggcc
gaggcgctgctgccgcacctgcgcgaccggccgctgtcgttcctgcgctatcccgacggc
cccgacgggcagctcttcttcaccaagaacccgccgcccggcacccccgactgggtgagg
accgcgcccgtaccccgctcggaggacccgcgcgcccgccaggtcgtcgtcgacgggctg
gcctcgctgatgtgggcggccaacctggtcgtggagttccacaccccgcagtggcgggcg
gcggccccggccgtcgccgaccggctcgtcctcgacctggaccccggcccgcccgccacc
gtggtcgagtgctgccgggtcgccctgtggctgcgggaacggctcgccgaggacgggctc
accgcgtacgccaagacctccggcgcgaagggcctgcacctgtacgtgccggtcgagccg
accccgtcggaggaggtgtccgcgtacgcccgcgggctcgccgtcgaggcggaggccgag
cacccgaagcacgtcgtgcaccggatggcgaaggcgctgcggcccggcaaggtcttcgtg
gaccacagccagaacgccgccgcgaagaccacggccgccccctacaccctgcgcgcccgc
cgcctcccggccgtgtcgacgccggtcacctgggaggaggtcgaggggtgccgcgatccg
gggcagctgatgttcctgctgggcgacctcggcccccgcctggggcggtacggcgacctg
ctggccccgctggccgccgacgagggggcggggccggtgccgggggcgtcggggggcggg
gggtccgggcggccgggggcgccggggcggccggggacgtccggggccggagggccgggg
cggccggagcctgggggtcggtcgtga

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