Serratia sp. AS12: SerAS12_4887
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Entry
SerAS12_4887 CDS
T01502
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srs03000
]
SerAS12_4887
Transcription factors [BR:
srs03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SerAS12_4887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
MarR_2
HTH_Tnp_ISL3
HTH_Crp_2
HTH_3
HTH_24
MerR
Motif
Other DBs
NCBI-ProteinID:
AEF52931
LinkDB
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Position
5292931..5293959
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AA seq
342 aa
AA seq
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MEHKKELPMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHKQIACVAGPEQMPLSHYRLQGYIQALRRNGINVESSYITRGDFTYEAGAQALTALM
AQPKPPTAIFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDIKLTQYCDPPLTTVAQPR
YEIGRQAMLLLLEQLHGQAVPSGSRLLDSELIIRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagaaagaattacccatggcaaccatgaaagacgttgccgagatggcgggc
gtttcaacggcaaccgtgtcgcgcgcgctgatgaacccggagaaggtgtcaacgccgacg
cgtcagaaagtggagcaggccgtcttggccgtgggctactctcctcatgccctctcgcgc
aatatcaagcgtaatgaatcccgtaccattctggtgatcgtccccgacatttgcgatccg
ttcttcgccgacgtgatccaggggatcgagcagaccgcggcgcagcaaggctatctggtg
ctgattggcgactgcgctcagcagaaccagcaggaacgaaccttcgtcaatctgattatc
accaagcaaatcgatggcatgctgctgctcggctccaacctgcccttcgacgccagcaag
gaagagcagcgtaatctgccgccaatggtgatggccaacgagtttgccccggagctggaa
ctgccgacggtacacatcgataacctgaccgccgccttcgaggctgtacattatttgcac
cagctcggacacaagcaaatcgcctgtgtcgccggaccggaacagatgccgctcagccat
tatcggctgcaaggctacattcaggcgctacgtcgtaatggcattaacgtcgaaagcagc
tatattacccggggtgatttcacgtacgaagccggtgcgcaggcgctgacagcgctgatg
gcgcaaccaaaacccccgacggcaatattctgccacagtgacgtcatggcaatcggcgtg
ctgtcacaggcgaaaaaaatggggctgcgagtaccgcaggacctttccatcgttggcttt
gacgacatcaagctgacgcagtattgcgatccgccgttaaccacggtggctcaaccgcgc
tatgagatcggccggcaagcgatgctgctgttgttggaacaactgcacggacaggcagta
ccaagtggctcccggctattggacagtgagttaattatcagaggcagcactgctgcccct
aaacgctag
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