Sinocyclocheilus rhinocerous: 107738206
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Entry
107738206 CDS
T04916
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
srx03015
mRNA surveillance pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107738206
09122 Translation
03013 Nucleocytoplasmic transport
107738206
03015 mRNA surveillance pathway
107738206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107738206
03041 Spliceosome [BR:
srx03041
]
107738206
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107738206
Spliceosome [BR:
srx03041
]
Complex C
Other components
EJC/TREX
107738206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
107738206
NCBI-ProteinID:
XP_016405428
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQKTSTHH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAETDGTDHEDHTEANDSIC
AAPNQDVAPSLVDQHKGGTAVAGGFGVTASESDELREKEMPGEPSPSAPAQPSAIASLSV
RVVGERGPTSSHVPADSDDDSEGGDDNDDEEEEWNPIAKRSRRAQPPKSQPVRERSGGSQ
QQPPPQHIPLLSQQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPPRQRISSSSSSGS
SSSDSCSSSPEPAGDSTERRPGPLTLLARKMASEGAFSGAGKRDREGMDGQRSHHEGVVS
AITHTANAASVLSYPSLVISNQSVSVVRTAVVEESDGMKQDEGSHLLWEQENKKRERQRE
QERLKALEKEREEKKALEEERTRVLERERQEREEALKRERERALQQEREEKEKALQRERE
EREKLEREQALERERLEREQALERERQEKERLERERQEALERERLERERLEKERQERQKA
LERERLKKEKHERERELALERERLERERLEKERLEREQALERERLERERLEKERQEREQA
LKRERLERERLEKERIEREQALERERLERERLEKERLEREQALERERLERERFEKERLER
EQALERERLERERFEKERLEREQALERERLERERLEKERQQALERERLEKERLEKDRQEQ
ALERERLEKERFEKERQEREKQEKEQALERERLEREAAMEKERQEMERAKEQQRLEKERA
EKERHEREAAKRQERERHEKEKALEEERLQKEQALEREREAQRKAEEERERTLEKEKEEQ
ERALKEEQQRALEERERLLEQKRVQEEKEKALKLEKEEEHEKKRESRLPPWKRGRDIGGL
SYPAAHPASLESPTEKSDESETGEPQSTGKDARSTEPVLQQSPTLATPLSAQSSSKKSRF
LRHAPVTTPLPSSPTSVLKRPRTFSDSPMPQAPSIPLASKPEEKDASQAPQTSVIASASN
ELESKTPEVPAKQHAPQEEEKMKMSEDSEASKDTKHKTLRRVEDEEKPLSEEKKRGRERE
KKQVEKKERKSSSSSDSSSSNSDSGSSSSSRSSSSSSEEEEKSHSTSGGRKSKEVQKESS
SQATEKVAAVKPPTAQCKKRVFTEQEEKDTGNEDVIQTKKPCLELQDEKVTRGRKDDIEE
DDTNKDTTSSEVKEAVMAEPEKVPESSEESTTPKTFSARRISLGSSKQSPGVVSSEGEAE
AASSAGAGRKRRWGSSTAVTAKKPSISITTDSLKYSSVEEAMATRTALHGVKWPQSNPKF
LSVDFCTQEELDFHRGLGPAGEKPTEEPRGAAAAGPGRPVPPPLLSERDQWAEREREMER
RERTRAEREWDRDKVKDFSKPGEEREAGARRSRSRDRERRRKERGKSKEKKTDKKEKGPE
DPPAKLLDDLFRKTKAAPCIYWLPLTEEQAAQRAAARAERMREREKRRKEMEEEDKKREE
ERRERMKTGGATRGEGERDRDRERDRDRGREREREGDKRKEGYRRPGGNSASGSRRSRSH
SDPPLRDRRH
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggaggccgctccattcgctccgggtggcg
gatttgaaggcggcattggaagagagagggcttccgaaaagcggacagaagaatgctctc
atcaagaggctcaaaggggctctcatgttggagaaccttcagaaaacctccactcatcac
attggcctgcagcctaactcccggattggggaggaaatgagtcagaacagcttcattaaa
cagtacctggccaaacagcaagagcttctgaggcagcgtttggagagggaagcacgagag
gcagctgaaactgatggaacagaccatgaagaccacacagaggccaatgacagtatttgt
gctgcccctaaccaggatgttgctccctccttagttgaccaacacaaaggaggtacagca
gtggctgggggatttggggtgactgcgagtgagagtgatgagctcagagaaaaagaaatg
cctggggagccgtccccctctgcacctgcccagcctagcgcaatagcctctttgtcggtg
cgggttgttggtgaaagaggaccaacatcaagccatgtaccggctgacagtgatgatgac
agtgaaggcggggatgacaatgatgacgaggaggaggagtggaaccccattgctaaacgg
agtcgtcgagcacagcctccaaaaagccagccggtgagggaaagatctggtggctcgcag
cagcagccgcccccccaacacatacctttactatcacagcagctcagacagcccactcct
cccccatctcctcctcctgaactctcttttccactcccagacacccctaaacagagcccc
cctagtcccggagagcccccacctaggcagcgtatatctagctcttcgagctctggtagt
tccagtagtgacagttgtagcagtagccctgaaccagcaggcgactccacagaacgcaga
ccaggcccactgaccttactggcacgcaagatggcgtctgagggagctttctctggtgca
ggaaagcgtgatagggagggaatggatggacagagaagccaccatgagggagttgtgtct
gcaattactcacacagctaatgcagcgtcagttttgtcataccctagtttagtgatctcc
aaccaaagtgttagtgtcgttagaacagcggtggtggaagagagtgatggtatgaagcag
gatgagggtagccatcttttatgggagcaagaaaacaaaaagagggaaagacagcgagaa
caagagaggctgaaagccctagaaaaggagagagaggaaaagaaggcattggaagaagag
cgaacacgagttttggaacgggaaagacaggaacgagaagaagctctgaaacgggagagg
gagagagctttacagcaagaaagggaagagaaagaaaaggccttacagcgggagagggaa
gagagggagaagcttgaaagagaacaagcattggaaagagaacgactcgagagagaacaa
gcgctggaacgagagaggcaagaaaaggagagactggaaagagagagacaggaagcttta
gagcgggagagattggagagagagaggcttgagaaagaaagacaagaacgacaaaaagcc
ttagagagggaaagactcaagaaagaaaaacacgaacgagaacgagaactagctctagag
agggagagattagagcgagagaggcttgaaaaggaaagactagaaagagaacaagctcta
gagagggagagattggagagagagcggctcgagaaggaaagacaagaaagagaacaagct
ctaaagagggaaaggttggagagagagcggcttgagaaagaaagaatagaacgagaacaa
gctctagagagggaaaggttggagagagagaggcttgagaaagaaagactagaacgagaa
caagctcttgagagggaaaggttggagagagagagatttgagaaagaaagactagaacga
gaacaagctcttgagagggaaaggttggagagagagagatttgagaaagaaagactagaa
cgagaacaagctcttgagagggaaaggctggagagagagaggcttgagaaagaaagacaa
caagctctagagagggagagattggaaaaagagcgacttgagaaggacagacaagaacaa
gctttagaaagggagcgattggaaaaagaacggtttgagaaggaaaggcaggaacgagag
aagcaagaaaaagaacaagctctagagagggagagactagaaagagaagctgcaatggag
aaagagagacaagaaatggaaagggccaaagaacagcaaagactggagaaagagagggct
gaaaaagaaagacatgaaagagaagccgccaagaggcaagagcgagaaaggcatgagaaa
gagaaagctttggaagaggaacgattgcagaaagaacaagctcttgagcgtgagagagaa
gcacagaggaaagcagaggaggaacgagagcgaactttggaaaaagagaaagaggagcag
gagagggctttaaaagaagagcagcagagagccttggaggaaagggaaagacttttggag
caaaaaagagtgcaggaggaaaaagaaaaggctttgaaacttgaaaaagaggaggaacat
gagaaaaaaagagaaagccgtcttcctccgtggaagcgtggtcgtgatatcggtggtctc
tcctatccagcggcccatcctgcttctctggagagtccaacggagaagtcagacgagagc
gagactggtgaacctcagagcactggcaaagatgctcgatctacagagcctgtcctacaa
cagtcacccacacttgcaacaccactatccgctcaatcttcttcaaagaagtcccgcttc
ctcagacatgctcctgtgacaactcctctcccttcctctccgacttctgtgctgaagaga
cctcgtactttctcagacagccccatgccacaagccccctcaattccattagcatctaag
cctgaggaaaaagatgcctctcaggctcctcaaacatcagtcattgcttcagcctccaat
gagcttgagagcaagacccccgaggtgcctgccaaacaacatgcaccacaagaggaagag
aagatgaagatgtcagaggatagtgaggcaagcaaagacactaaacataagacactcaga
agagtggaggatgaggagaaacctctttcagaggagaagaaaagaggaagagaaagagaa
aagaagcaggtggagaagaaagaaagaaaatcatcatcctccagcgactcctcctcatcc
aactcggattctgggtcttcatcctcctcacgctcctccagttcatcatcggaggaggag
gagaaaagtcattccacttcaggtggtaggaagtctaaagaggtccagaaagagtcttca
tctcaggccacagaaaaagttgcggctgtaaagcctcctacagcccaatgcaaaaaacga
gtcttcacagagcaggaggaaaaagacacgggcaatgaggatgtcatccaaaccaagaaa
ccctgccttgaactacaagatgagaaagtaacaaggggaagaaaggacgatattgaagag
gatgacactaacaaagacactaccagtagtgaggtgaaggaggctgtcatggcggagcct
gagaaggttccagagagcagtgaggagagcaccacgccaaagaccttctctgcccgaagg
atttctctcggcagcagcaaacagtctcctggggtggtgagttcggagggggaagcggag
gccgcaagcagtgctggcgctggcaggaagaggagatggggctccagtacagctgtcact
gccaagaaaccctccatcagtatcaccacagactctttgaagtactctagtgtggaagag
gcgatggccactcgtacagcactacatggggttaagtggccccagagtaaccctaagttc
ctcagtgttgatttctgcacacaagaggagttggacttccacaggggtttgggtcccgca
ggagaaaagccaacagaggagcctcgtggggcggcagccgctgggcctggccgtccagta
cccccgcctctcctttcagagcgtgatcagtgggcagaacgagaaagggaaatggaaagg
agggagaggacgcgtgcggagagggaatgggacagagataaagtgaaagacttcagcaaa
cctggagaggagcgggaagctggggccagaagatcgcgttcacgagatcgcgaaaggcgg
cgcaaggaaagaggaaagagcaaagagaagaaaacagataaaaaggaaaaaggaccagag
gatccacctgctaaactgctggatgacctcttccgcaaaaccaaagcggctccgtgcata
tactggctccccctgactgaggagcaggcagcacagagggcagcggctcgtgctgaacgc
atgagggaaagagagaagaggaggaaggagatggaagaggaggataagaaacgcgaggag
gagcggcgagagaggatgaagaccggcggggccaccagaggggaaggtgagagagaccgt
gacagagaacgagaccgagacagaggtcgagaaagggagcgagagggggataaacggaag
gagggataccgcaggcctggcggaaacagtgcaagcgggagcaggaggtcacgaagccac
agcgaccctccgctccgagatcgacgacactaa
DBGET
integrated database retrieval system
