Serratia rubidaea: AXX16_3989
Help
Entry
AXX16_3989 CDS
T04417
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
srz
Serratia rubidaea
Pathway
srz00550
Peptidoglycan biosynthesis
srz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXX16_3989
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srz01002
]
AXX16_3989
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
AXX16_3989
Enzymes [BR:
srz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AXX16_3989
Peptidases and inhibitors [BR:
srz01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
AXX16_3989
Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
AXX16_3989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AML59672
LinkDB
All DBs
Position
4291180..4292391
Genome browser
AA seq
403 aa
AA seq
DB search
MKHVTSFRLIKGIALSTVIAMGAASSAQAEDANLKTMIPGVPQIDAESYILIDYNSGKVL
AESNADARRDPASLTKMMTSYVIGQALKAGKIGQDDLVTVGQDAWATGNPVFKGSSLMFL
KPGDRVPVSKLTRGINLQSGNDACVAMADYVAGSQDSFVNLMNNYVQLLGLKNTHFKTVH
GLDADGQFSSARDMALIGQALIRDVPDEYAIYKEKEFTFNNIRQVNRNGLLWDKSLNVDG
IKTGHTNAAGYNLVASATEGQMRLISAVLGGHTYKGRETESKKLLTWGFRFFETVAPLKA
GKEFASEPVWFGDADRVELGVDKDVYLTIPRGRMKDLKASYVLNTPEIHAPLTKNQVVGS
INFQLDGKTIDQRPLVVLNEVKEGGIFGRLVDYIKLMFHHWFG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatgtaacttcttttcgcttaatcaagggcatcgcgctcagcaccgttatcgct
atgggcgctgccagcagcgcgcaggccgaagacgccaaccttaaaaccatgatcccgggt
gttccgcaaattgacgcggaatcttacatcctgattgattacaactccggtaaggttctg
gcggaatccaatgcggatgcgcgtcgcgacccggccagcctgaccaaaatgatgaccagc
tacgtcatcggccaggcgctgaaagccggtaaaatcggccaggacgatctggtcaccgtc
ggccaggacgcctgggcgaccggcaacccggtgttcaaaggctcttcgctgatgttcctg
aagccgggcgatcgcgtaccggtttccaaactgacgcgcggcatcaacctgcagtccggc
aatgacgcctgcgtggcgatggccgactacgtggcgggcagccaggattcattcgtcaat
ctgatgaacaactacgttcagctgttgggcctgaaaaatacccacttcaagaccgtgcac
ggtctggacgccgacggacagttcagctccgcgcgcgatatggcgctgatcggccaggcg
ctgatccgcgacgtgccggacgagtacgccatctataaagaaaaagagttcacctttaac
aatatccgtcaggtaaaccgcaacggtctgctgtgggataagagcctgaacgtcgacggc
atcaaaaccggtcacaccaacgccgcaggttacaacctggtggcttccgccaccgaaggt
cagatgcgtctgatctccgccgtgctgggcggccatacctataaaggccgtgaaaccgaa
agtaaaaagctgctgacctggggcttccgcttctttgaaaccgtcgcgccgctgaaggca
ggcaaagagttcgcctctgagccggtatggttcggcgatgccgaccgcgttgagctgggc
gtcgataaagacgtttacctgaccatcccgcgcggccggatgaaagatctgaaagccagc
tacgtgctcaacacgccggaaatccacgcgccgctgaccaaaaatcaggttgtcggcagc
atcaatttccaactggacggtaaaaccatcgaccagcgtccgctggtagtgctgaatgaa
gtgaaagaaggcggcatcttcggtcgtctggtggattacatcaagctgatgttccatcac
tggttcggctaa
DBGET
integrated database retrieval system