Spiroplasma sabaudiense: SSABA_v1c00600
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Entry
SSABA_v1c00600 CDS
T03048
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ssab
Spiroplasma sabaudiense
Pathway
ssab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SSABA_v1c00600 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssab03400
]
SSABA_v1c00600 (uvrB)
DNA repair and recombination proteins [BR:
ssab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSABA_v1c00600 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SSABA_v1c00600 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
P-loop_SecA
AAA_7
AAA_22
AAA_19
HerA_C
AAA_30
TrwB_AAD_bind
UB2H
DUF87
AAA_5
AAA_16
FtsK_SpoIIIE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHI53472
UniProt:
W6A8Y0
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All DBs
Position
67758..69734
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AA seq
658 aa
AA seq
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MKQEQNDFKLVTDYQPAGDQPQAILELYNGLKENKKHQVLLGATGTGKTFTIANIIQKFQ
KQTLVLAHNKTLAMQLYIELKEFFPENRVEYFVSNFDFFQPEAYMPARDLYIDKDAKINQ
ELDMMRLSAMNGLMLRKDTIVVASVASIYAAQNPEEYGAVFFELRVGETLSKKELLSFLI
KTGYVRNEIETVRGTFSANGDVIKIVPSWTDQLIFRISLFGNEIESIETLEPYNNKIIQR
MTLATIFPATSYVTAEDKMKTVIENIKAELKDRLKELREDGKMLEAQRLEQRTNYDLESL
SEFGTVSGVENYSAHLDFRAPGVPPYTLLDYFEKDFLTVIDESHMMIPQVRGMSNTDKSR
KKNLVDYGFRLPSAMDNRPLNFEEFSNKLNQVIYTSATPGDYEMELTEGKFVQQIIRPTG
LLDPIIEVRSTENQIENIIEEILKRREKNERVFITTLTIRMSEDLTSYLQERNIKVAYLH
SELKTIERTTVLNDLRKGVYEAIVGVNLLREGLDIPEVSLVCILDADKQGFLRNTRSLIQ
TTGRAARNASGLVIFYADQISKAMQETIDETDRRREIQARYNLENNIVPKTILKKISDFG
IDDATRKQIISMTTKKNSAKNQKNSLVEKLRADMVAAAKELNFEKAAQIRDIIIELEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagaacaaaatgattttaaattagtaaccgattatcaaccggccggagaccag
cctcaagcaattttagaactttataatggcctaaaagagaacaagaaacaccaagtgctt
ttgggggcaacaggaacagggaagactttcactattgcaaatataattcaaaaatttcaa
aaacagacactagtactagctcataataaaacccttgctatgcaattgtatattgagtta
aaagaatttttcccagaaaatcgtgtagaatattttgtctccaactttgacttctttcag
ccagaggcttatatgccagccagagatttatatattgataaagatgccaaaataaatcaa
gagttggatatgatgcgcctaagcgcaatgaacggtttaatgttgcgaaaagacacaatt
gtagtagcttctgttgcatcaatttatgctgcacaaaatcccgaagaatacggagcagtt
ttttttgaattgcgtgttggagaaaccttaagtaaaaaagaattattatcattcttaatt
aaaacaggatatgttcgaaacgaaatcgaaactgtacgaggaacattctcagcaaacgga
gatgtcataaaaattgtcccaagttgaacggaccaattaatatttagaatttcactattt
ggaaacgaaattgagtcaattgaaactttggaaccatataataacaaaataattcaaaga
atgacactggcaacaattttcccagcaacaagttatgtaacagctgaagacaaaatgaaa
actgtaatagaaaacattaaagcagaattaaaagatcgcctcaaagaacttcgtgaagac
ggaaaaatgttagaggctcagagattggaacaaagaactaactatgatttggaatccttg
agtgagtttggtactgtaagtggagttgaaaactattctgcacacttagattttagggcc
ccaggtgttcccccatacacattgctggattattttgaaaaagattttctaacagtgatt
gatgaatctcatatgatgatcccacaagttcgaggaatgtcaaatactgataaaagccga
aaaaaaaatttagtggattacggttttcgtttacctagtgcaatggataatcgcccatta
aattttgaagagttttcaaataaattaaatcaagtgatttacacttcagcaactcctgga
gattatgaaatggaattaaccgagggaaaatttgttcagcaaattattcgtccaacagga
ttactagatccaataattgaagttcgctcaacagaaaatcaaattgagaacattattgaa
gaaattttaaagcgtagagagaaaaatgaacgagtttttataacaaccctaactattcga
atgtcagaagacttaacaagctacttgcaagaacgaaacattaaagttgcttacttgcac
tcagaattaaaaacaattgaaagaacaacggttctaaatgatttaagaaagggagtttat
gaagcaatagtgggagttaaccttttaagagaaggtttggatattccagaagtaagtttg
gtttgtattttagatgctgataaacagggatttttacgaaacacacgaagtttgattcaa
accacaggccgagctgctcgtaatgcttcgggtttagtaattttttatgcagaccaaatt
tcaaaagcaatgcaagaaactattgatgagacagatcgccgccgcgaaattcaagctcgc
tacaatttagaaaataatattgtgccaaaaactattttgaaaaaaatttcagactttggt
attgatgatgccactagaaagcaaattatttcaatgacgactaaaaagaatagtgcgaag
aatcaaaaaaatagtttggttgagaaattgcgagctgatatggttgccgctgctaaggaa
ttaaattttgagaaggctgctcaaattcgagatattattattgaactagaaggataa
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