Spiribacter salinus: SPISAL_03190
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Entry
SPISAL_03190 CDS
T02685
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssal
Spiribacter salinus
Brite
KEGG Orthology (KO) [BR:
ssal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssal03016
]
SPISAL_03190 (truB)
Enzymes [BR:
ssal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPISAL_03190 (truB)
Transfer RNA biogenesis [BR:
ssal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPISAL_03190 (truB)
Prokaryotic type
SPISAL_03190 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AGM40732
UniProt:
R4VJN9
LinkDB
All DBs
Position
649358..650284
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AA seq
308 aa
AA seq
DB search
MARKKGRNVDGILLLDKPSGLTSNAALRRVSRYLDARKAGHTGSLDPLATGLLVLCFGEA
TKVSGWLLDADKSYTCLARLGMTTDSADADGQILQRRQVPAVDDEALEDVLSGFRGQQAQ
VPPMFSALKHEGQRLHELARQGIEVERPPRQVCIHDLNATRVAPDALRLEVTCSKGTYIR
SLVADIGEQLGCGAHVEQLRRTGLGPFKGPSMWSLETLERLSGQGAGALDACLLPTDTAL
ADYPAVTLAASAAERFCHGQAVSADRPTEAASILTVYGPDAAFLGIGAWRDDGAIAPRRL
LVQRTARG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaagaagggccgtaatgttgacgggatcctgctgctcgacaagccgagcggg
ctgacctcgaatgcggcattgcgccgcgtcagtcgttatctggacgcgcgcaaggccggg
cacaccggcagccttgatccattggcaaccgggctgctggtgctttgctttggcgaggcc
accaaagtcagtggctggctgctcgatgcagacaagtcgtacacgtgtcttgcccgattg
ggcatgaccaccgacagcgcggatgcggatggacagatcctccagcgccgtcaggtgccc
gcagtggatgatgaggcgcttgaggacgtgctgtcaggtttccgggggcaacaggcccaa
gtgccgccgatgttttctgcgctcaaacacgagggtcaacggctgcatgagttggcccgg
caggggattgaggttgagcggccaccgcggcaggtctgcatccatgacttgaacgccacc
cgcgtggcgcccgatgcattgcgactggaagtgacctgctcgaaaggcacgtatatccgg
agccttgtggccgatatcggcgagcagctgggatgcggcgcccacgtggagcagctgcgg
cgtaccgggttggggccatttaaagggccgtcgatgtggtcactcgagacgctggagcgc
ttgagtgggcagggagccggcgcgctggatgcatgtctgttgccgactgataccgcattg
gcggattatcccgcggtcactctagcggcgtcggcggcggagcggttctgtcacggtcag
gcggtcagcgcggaccgtcccaccgaggcggcgtccatcttgacggtttacgggcccgat
gctgcgtttcttggtatcggtgcctggcgtgacgatggtgcaattgcaccgcgtcgtttg
cttgttcagcgaaccgcccggggatag
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