KEGG   Sus scrofa (pig): 100153900
Entry
100153900         CDS       T01009                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100153900 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100153900 (CDC5L)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100153900 (CDC5L)
Spliceosome [BR:ssc03041]
 Complex B
  Other components
   Prp19 complex
    100153900 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    100153900 (CDC5L)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100153900 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 Rap1_C
Other DBs
NCBI-GeneID: 100153900
NCBI-ProteinID: XP_001929632
Ensembl: ENSSSCG00000001708
UniProt: F1RQS5 A0A8D0USH3
LinkDB
Position
7:39384397..39427729
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPASQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHGS
EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL
LGLPAPKNDFEIVLPENAEKELEDREVDDTYIEDAADVDARKQAIREAERVKEMKRMHKA
VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
KPVGFGTNNAEHIAYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLNDLWDQIEQAYLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER
EKELQHRYADLLLEKETLKAKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgcctcgaattatgatcaaggggggtgtgtggaggaataccgaggatgaaattttgaaa
gcagcggtaatgaaatatggaaaaaaccagtggtctaggattgcctcactgctgcataga
aaatcagccaagcagtgcaaagccagatggtatgagtggttggatccaagcattaagaaa
acagaatggtccagagaagaagaggaaaaactgttgcacttggccaagttgatgccaact
cagtggaggaccatcgctccaatcattggaagaacagccgcccagtgtttggaacactat
gaatttcttctggataaagctgcccaaagagacaatgaagaggaaacaacagatgatcca
cgaaaacttaaacctggagaaatagatccaaatccagaaacaaaaccagcacggcctgat
ccgattgatatggatgaggatgaactcgagatgctttctgaagctagagcccgcctggct
aatactcagggaaagaaagccaagaggaaagcacgagagaaacagttggaagaggcaagg
cgtcttgctgccctccagaagagaagagaacttcgagcagctggcatagaaattcagaag
aaaagaaaaaagaagaggggagttgattataatgctgaaatcccatttgaaaaaaagcct
gctcttggtttctatgacacttctgaggaaaactaccaggctctagatgctgatttcaga
aagttaagacaacaggatcttgatggggagctaagatctgaaaaagaaggaagagataga
aaaaaagacaagcagcatttgaaaaggaaaaaagaatctgatttaccatcagctattctt
caaactagcggtgtttctgaatttactaaaaagagaagcaagctagtacttcctgcccct
cagatttcagatgcagaactccaggaagttgtaaaagtgggccaagcaagcgaaattgca
cgtcagactgccgaggaatctggcataacaaactctgcttccagtactctcttgtctgag
tacaatgtcaccaacaatagcatcgctctgagaacaccacgaacaccagcttcccaggac
agaattctgcaggaagcccaaaacctcatggccctgaccaacgtggacacccccttgaag
ggcggacttaacacccccctgcatgagagcgacttctcaggtgtgactccccagcggcag
gtagtacagactccaaacacagttctctctaccccgttcagaactccttctcatggatct
gaagggctgactccccgaagtgggacaactcccaaaccagttattaactccaccccgggt
agaactcctcttcgagacaagttaaacattaatcccgaggatggaatggcagactacagt
gacccctcttatgtgaagcagatggaaagagaatctcgtgaacaccttcgtttaggcttg
ttgggccttcctgctcctaagaacgactttgaaattgttctaccagaaaatgctgagaag
gaactggaagaccgtgaagtagatgatacttatattgaagatgctgctgatgtggatgca
cggaagcaggccatacgagaggcagagcgtgtaaaggaaatgaaacgaatgcacaaagct
gtccagaaagacctgccaagaccatcagaagtcaatgaaactattctaagacccttaaat
gtagaaccacctctaacagatctacagaaaagtgaagaactgatcaaaaaagaaatgatc
acaatgcttcattatgaccttctacatcacccttacgaaccatctggaaataaaaaagga
aaacctgtaggattcggtaccaataacgcagagcacattgcctatctggagcataaccct
tatgaaaagttctccaaagaagagctgaaaaaggcccaggacgttctggtacaggagatg
gaagtggtaaaacaaggtatgagccatggagaactctcaagtgaagcttataaccaggtg
tgggaagaatgctacagtcaagttttgtatcttcctgggcagagccgctacacacgggcc
aacctagccagcaaaaaggacagaatcgagtccctggaaaagaggcttgagataaacagg
ggtcacatgacaacagaagccaagagagctgcaaagatggaaaagaagatgaaaattttg
cttgggggctaccagtctcgtgcaatggggcttatgaaacagttgaatgacttatgggac
caaattgagcaggcttacttggagttacgcacttttgaagaactcaagaaacatgaagac
tctgctattccccggaggctagagtgtctaaaagaagatgttcagcgacaacaggaaaga
gaaaaggaacttcagcatagatatgctgatttgctgctggagaaagagactctaaaggct
aaattctga

DBGET integrated database retrieval system