Sus scrofa (pig): 100154847
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Entry
100154847 CDS
T01009
Symbol
CARMIL3
Name
(RefSeq) LOW QUALITY PROTEIN: capping protein, Arp2/3 and myosin-I linker protein 3
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100154847 (CARMIL3)
Membrane trafficking [BR:
ssc04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
100154847 (CARMIL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
100154847
NCBI-ProteinID:
XP_020954881
Ensembl:
ENSSSCG00000002012
LinkDB
All DBs
Position
7:complement(75222528..75241243)
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AA seq
1372 aa
AA seq
DB search
MAKSSAELTRELQDSIRRCLSQGAVLQQHRVKLETKPKKFEDRVLALTSWRLHIFPLKVP
AKVESSFNVLEIRAFNTLSQNQILVETERGMVSLRLPSAESVDQVTRHVSSALSKVCPGP
GSLIRRGNADTPEGPRDTSPNSETSTSTTHSVCGGFSETYAALCDYNGLHCREEVQWDVD
TIYHAEDNREFNLLDFSHLESRDLALMVAALAYNQWFTKLYCKDLRLGSEVLEQVLHTLS
KSGSLEELVLDNAGLKTDFVQKLAGVFGENGSCVLHALTLSHNPIEDKGFLSLSQQLLCF
PTGLTKLCLAKTAISPRGLQALGQTFGANPAFASSLRYLDLSKNPGLLATDEANALYSFL
AQPNALVHLDLAGTDCAIDSLLGALLHGCCSHLTYLNLARNSCSHRKGREAPAAFKQFFS
SAYTLSHVNLSATRLPLEALRALLQGLSLNSHLSDLHLDLSSCELRSAGAQALQEQLGAV
TCVGSLDLSDNGFDSDLLTLVPALGKNKSLKHLFLGKNFNVKAKTLEEILHKLVQLIQEE
DCSLQSLSVADSRLKLRTSILINALGSNTCLAKVDLSGNGMEDIGAKMLSKALQINSSLR
TILWDRNNTSALGFLDIARALESNHTLRFMSFPVSDISQAYRSAPERTEDVWQKIQWCLV
RNNHSQTCPQEQAFRLQQGLVTSSAEQMLQRLCGRVQEEVRALRLCPLEPVQDELLYARD
LIKDAKNSRALFPSLYELGHMLANDGPVRQRLESVASEVSKAVDKELQVILESMVSLTQE
LCPVAMRVAEGHNKMLSNVAERVTVPRNFIRGALLEQAGQDIQNKLDEVKLSVVTYLTNS
IVDEILQELYHSHKSLARHLAQLRTLSDPPGGTGQGQDLSSRGRGRNHDLEETTDDELGT
NIDTMAIKKQKRCRKIRPVSAFISGSPQDMESQLGSLGIPPGWFSGLGSSQPTASGSWEG
LSELPTHGYKLRHQTQGRPRPPRTTPPGPGRPSVPVPGSRQENGMATRLDEGLEDFFSRR
VMDESSSYPRTLRTLRPGLSEPPLPPLQKKRRRGLFHFRRPRSFKGDRGPGSPTTGLLLP
PPPPPPPTQEXPPSPDPPSLGNNSSPCWSPEEDSSLVPTFGGGQGPSFRRKMGTEGAEPG
EGGQAPATAQQPRVHGVALPGLGRAKGWSFDGKREGTGPDLEGSVQAWQKRRSSDDAGPG
AWKPPPPPQSTKPSFSAMRRAEATWHIAEESAPNPSCKSPSPASQDGEEEREGALFAERP
APARTLKLQDPPLAPRPPKPVAVPRGRRPPQEPGSREEAEAGGAAPGMNKPRLRLGSQQD
QEEPEVQGPPDPGRRTAPLKPKRTRRAQSCDKLEPDRRRPPDSTGTSEPGTD
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtccagcgcggagctcacccgcgagctgcaagacagcatccgaagatgcctg
agccaaggggctgtgctccaacaacaccgtgtgaagctggagacgaagcccaagaagttc
gaggaccgagtgctggccctgacctcctggcgcctccacatcttcccccttaaagtccca
gccaaggtggaaagctccttcaatgtcctggagatccgcgccttcaacacgctcagtcag
aaccagatcctagtggagacggagcgtggaatggtgagcctgcggctgccatcagctgag
agcgtggaccaggtgacccgacatgtgagctctgccctctccaaggtctgccctggccct
gggagtctaatccggcgtggaaatgcggacaccccagaagggccccgagacacatccccc
aactctgagacttccacatccaccacgcacagtgtctgtggtggcttctccgagacctac
gctgccctgtgtgactacaacgggctgcactgccgtgaggaggtgcaatgggacgtggac
accatctatcatgccgaggataaccgggagttcaatcttttggatttcagccacttggag
agccgagacttggccctaatggtggcagccctggcctacaaccaatggttcaccaaactc
tactgcaaggacctgcggctgggctctgaagtgctcgaacaggtgctacacaccctcagc
aagtcggggagcctggaagagctggtgctggacaacgctgggcttaagacggactttgtc
cagaagctggccggggtgtttggggagaacgggagctgtgtgctgcatgccctcactctg
tcccacaaccccatcgaggacaagggtttcctcagtctgagccagcagctcctctgcttt
cccactggcctcaccaagctgtgcctggccaagactgccatttcccctcgagggctccag
gcactgggccagaccttcggggccaatccggcctttgccagctcccttcgatacctggac
ctgagcaagaaccctgggctgctcgccacagacgaggccaatgccctctacagtttcctg
gcccagcccaacgccctggtacacctggacctggcggggaccgactgtgccattgactcg
cttctgggtgccctgctccatggctgctgctcccacctcacctacctcaacctggcgcgc
aacagctgctcccacagaaagggccgggaagccccagcagccttcaagcagttcttcagc
agcgcctacactctgagccacgtcaacctgtcggccacaaggctgcccctggaggccctc
agggcgctgctccagggcctctccctcaacagtcacctcagcgatctgcatctggacctc
agcagctgcgagctgcgctcagctggagcccaggctttgcaggagcagctgggggctgtc
acctgtgtgggcagcctagatctgtcagacaatgggtttgactcggacctcctgacgctg
gtgcctgcacttggcaagaacaagtctctcaagcacctgttcctgggcaagaacttcaac
gtcaaagccaagaccctggaggagatcctccacaagctggtgcagctgatccaggaagag
gactgctccctgcagtcactgtccgtggcagactcccggctgaagcttcgcaccagcatc
ctcatcaatgccctgggcagcaacacctgcctggctaaggtggatctgagcggcaatggc
atggaggacatcggggccaagatgctgtctaaggccctgcagataaactcctccctcagg
actatcctgtgggatcggaacaatacatctgccctgggctttctggacattgcaagggcc
ctagagagcaaccacacgctgcgcttcatgtccttccctgtgagcgacatctcccaagcc
taccgcagcgcccccgagcgcaccgaggacgtctggcagaagatccagtggtgcttggtg
aggaataaccattcccagacgtgtccccaggaacaggccttcaggctgcagcagggcctg
gtgaccagcagcgccgagcaaatgctgcagaggctgtgcggacgggtgcaggaggaggtt
cgggccctgaggctgtgccccctggagcctgtgcaggatgagctgctctacgcccgggac
ctcatcaaggacgccaagaactcccgggcgctgtttcccagcctctatgagctgggccac
atgctggccaacgacgggcctgtgcggcagaggctggagtcagtagccagtgaggtatcc
aaggctgtggacaaggagctgcaggtgatcctggagtccatggtcagcctaacgcaggag
ctatgccccgtggccatgcgggtggccgaagggcacaacaagatgctgagcaatgtggcc
gagcgtgtcactgtgccccggaacttcatccgaggggcgctgctggagcaggcgggccag
gacattcagaacaagctggatgaagtgaagctctcagtcgtcacctacctgaccaactcc
atagtggacgagatcctgcaggagctataccactcccacaagagcctggcccgacacttg
gcccagctaaggacactgtcagatccgccaggggggacgggccaaggacaggatctgtcc
tcccggggccgaggccggaaccatgaccttgaggagaccacggatgatgaacttgggacc
aacatcgacaccatggccatcaagaagcagaaacgctgccgcaagatccggccagtgtct
gccttcattagtgggagccctcaggacatggaaagccagctggggagcctggggatcccc
cctggctggttctcaggactcgggagcagccagcccacagctagtggctcctgggaaggc
ctttctgagctgcccactcatggctataaactaaggcatcaaacacaagggaggcctcgg
ccccccaggaccacccctccgggacctggacggcctagcgtgccagtacctgggtctcgt
caggagaacgggatggccacccgcctggatgaggggctggaggacttcttcagccgaagg
gtcatggatgaaagctccagctacccccggactctgaggaccctgcggccaggcctctcg
gagccgccactgcctccactccagaagaagaggcgccggggcctgtttcactttcgccgg
ccccggagcttcaagggggacagggggccagggtcccccaccactgggctcctcctccct
cctcccccacccccaccccccactcaggagnagccccccagcccagatcccccgagtctt
ggcaataactcctccccctgctggagcccagaggaggacagcagccttgtccccacattt
ggcgggggccaggggccttccttccgcaggaagatgggcactgagggggcagagcctggg
gaggggggccaggcccctgcaacagcacagcagccaagggtccatggtgtcgcccttcct
gggttgggaagagccaaaggttggagcttcgacgggaaacgagagggcacaggcccagac
ctggagggcagcgtccaggcttggcagaaacggcgctcttcggacgatgcagggcctgga
gcctggaagccccccccaccgccccaaagcaccaagccgagcttcagtgccatgcgccgc
gcggaggccacgtggcacatagctgaggagagtgcccccaaccccagctgcaagagcccc
agcccagcctctcaagatggggaggaagagagagagggagccctattcgctgagaggccg
gctcctgctagaacactaaagctgcaggacccccctctagctccacgaccccccaagcca
gtggctgtgccaaggggccgccgtcccccccaggagccagggagcagggaggaggctgag
gctgggggtgcagccccaggaatgaacaaaccccggctgaggcttggctcacagcaggac
caagaggagcccgaggtccaagggcccccagatccaggccgccggaccgcccccctgaag
cccaagaggacacggcgggcacagtcctgtgacaagctggagcctgatagaagacggccc
cctgactccacaggaaccagtgaaccaggaaccgactga
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